CRLF1

 

Full name: cytokine receptor like factor 1 Alias Symbol: CLF-1|CLF|CISS|CISS1
Type: protein-coding gene Cytoband: 19p12
Entrez ID: 9244 HGNC ID: HGNC:2364 Ensembl Gene: ENSG00000006016 OMIM ID: 604237
Drug and gene relationship at DGIdb

 

Expression of CRLF1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CRLF1 9244 206315_at -0.1909 0.6677
GSE20347 CRLF1 9244 206315_at 0.4390 0.0573
GSE23400 CRLF1 9244 206315_at -0.0627 0.4779
GSE26886 CRLF1 9244 206315_at 1.1103 0.0004
GSE29001 CRLF1 9244 206315_at 0.7076 0.0955
GSE38129 CRLF1 9244 206315_at 0.1180 0.6076
GSE45670 CRLF1 9244 206315_at -0.5816 0.0216
GSE53622 CRLF1 9244 32178 -1.4665 0.0000
GSE53624 CRLF1 9244 32178 -0.2578 0.2403
GSE63941 CRLF1 9244 206315_at -3.9158 0.0004
GSE77861 CRLF1 9244 206315_at 0.0007 0.9957
GSE97050 CRLF1 9244 A_33_P3252286 0.1608 0.7707
SRP064894 CRLF1 9244 RNAseq -1.6065 0.0003
SRP133303 CRLF1 9244 RNAseq -0.7762 0.0138
SRP159526 CRLF1 9244 RNAseq 0.7228 0.4285
SRP219564 CRLF1 9244 RNAseq 1.4875 0.1089
TCGA CRLF1 9244 RNAseq 0.1301 0.6060

Upregulated datasets: 1; Downregulated datasets: 3.  


 

Survival by CRLF1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CRLF1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CRLF1 9244 4 5 21
GSE20123 CRLF1 9244 3 3 24
GSE43470 CRLF1 9244 2 5 36
GSE46452 CRLF1 9244 47 1 11
GSE47630 CRLF1 9244 4 8 28
GSE54993 CRLF1 9244 15 4 51
GSE54994 CRLF1 9244 6 13 34
GSE60625 CRLF1 9244 9 0 2
GSE74703 CRLF1 9244 2 3 31
GSE74704 CRLF1 9244 0 3 17
TCGA CRLF1 9244 16 10 70

Total number of gains: 108; Total number of losses: 55; Total Number of normals: 325.  


 

Somatic mutations of CRLF1:

 

Generating mutation plots.

 

Highly correlated genes for CRLF1:

 

Showing top 20/297 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CRLF1ST3GAL20.7941303
CRLF1FAM167B0.771816303
CRLF1SH3PXD2B0.740605303
CRLF1CPT1C0.733269303
CRLF1C11orf960.7205403
CRLF1APBB10.719865303
CRLF1CCL70.715276303
CRLF1FHL30.713976303
CRLF1MIER20.713044303
CRLF1HSD11B10.707839303
CRLF1CCND30.707145303
CRLF1ZDHHC10.704735303
CRLF1SLC39A30.703757303
CRLF1TADA30.702591303
CRLF1TMTC10.694764303
CRLF1TSHZ30.693627403
CRLF1B3GALT60.688585303
CRLF1TMEM2140.683052303
CRLF1PRRX20.682073403
CRLF1DYRK30.681913303

For details and further investigation, click here