CRYBG3

 

Full name: crystallin beta-gamma domain containing 3 Alias Symbol: DKFZp667G2110
Type: protein-coding gene Cytoband: 3q11.2
Entrez ID: 131544 HGNC ID: HGNC:34427 Ensembl Gene: ENSG00000080200 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of CRYBG3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CRYBG3 131544 214030_at -0.8095 0.0924
GSE20347 CRYBG3 131544 214030_at -0.9384 0.0000
GSE23400 CRYBG3 131544 214030_at -0.4687 0.0000
GSE26886 CRYBG3 131544 214030_at -0.8049 0.0012
GSE29001 CRYBG3 131544 214030_at -0.8802 0.0007
GSE38129 CRYBG3 131544 214030_at -0.8107 0.0000
GSE45670 CRYBG3 131544 214030_at -0.5394 0.0003
GSE63941 CRYBG3 131544 214030_at -1.1424 0.0093
GSE77861 CRYBG3 131544 214030_at -0.9405 0.0063
GSE97050 CRYBG3 A_19_P00321202 0.0517 0.9111
SRP007169 CRYBG3 131544 RNAseq -0.5174 0.1566
SRP008496 CRYBG3 131544 RNAseq -0.2067 0.4082
SRP064894 CRYBG3 131544 RNAseq -1.3073 0.0107
SRP133303 CRYBG3 131544 RNAseq -0.9191 0.0000
SRP159526 CRYBG3 131544 RNAseq -1.1979 0.0132
SRP193095 CRYBG3 131544 RNAseq -0.6502 0.0000
SRP219564 CRYBG3 131544 RNAseq -1.6752 0.0067
TCGA CRYBG3 131544 RNAseq -0.2285 0.0010

Upregulated datasets: 0; Downregulated datasets: 4.  


 

Survival by CRYBG3 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of CRYBG3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CRYBG3 131544 20 1 9
GSE20123 CRYBG3 131544 19 1 10
GSE43470 CRYBG3 131544 18 1 24
GSE46452 CRYBG3 131544 12 7 40
GSE47630 CRYBG3 131544 16 6 18
GSE54993 CRYBG3 131544 2 6 62
GSE54994 CRYBG3 131544 27 5 21
GSE60625 CRYBG3 131544 0 6 5
GSE74703 CRYBG3 131544 14 1 21
GSE74704 CRYBG3 131544 14 1 5
TCGA CRYBG3|ENSG00000080200.5 NA 51 11 34

Total number of gains: 193; Total number of losses: 46; Total Number of normals: 249.  


 

Somatic mutations of CRYBG3:

 

Generating mutation plots.

 

Highly correlated genes for CRYBG3:

 

Showing top 20/1477 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CRYBG3TSPAN310.790004303
CRYBG3ZDHHC210.782354404
CRYBG3FAM122A0.776983303
CRYBG3SNORA680.774593404
CRYBG3ZNF6810.770528303
CRYBG3UBE2F0.766808303
CRYBG3SMC5-AS10.757034303
CRYBG3VAPA0.753277303
CRYBG3MMEL10.752843403
CRYBG3MAGI30.751094404
CRYBG3ACPP0.750907808
CRYBG3FAM214A0.748473404
CRYBG3RAB11A0.747851909
CRYBG3TJP10.745439909
CRYBG3ZNF8230.741607505
CRYBG3KLB0.741031404
CRYBG3RAB5A0.739909909
CRYBG3C5orf66-AS10.738302505
CRYBG3CAST0.7383909
CRYBG3SLC46A20.737914505

For details and further investigation, click here