DYNC1LI2

 

Full name: dynein cytoplasmic 1 light intermediate chain 2 Alias Symbol: 
Type: protein-coding gene Cytoband: 16q22.1
Entrez ID: 1783 HGNC ID: HGNC:2966 Ensembl Gene: ENSG00000135720 OMIM ID: 611406
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of DYNC1LI2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 DYNC1LI2 1783 224616_at -0.2776 0.4977
GSE20347 DYNC1LI2 1783 203590_at 0.0916 0.3910
GSE23400 DYNC1LI2 1783 203590_at -0.0968 0.3468
GSE26886 DYNC1LI2 1783 224616_at 0.0910 0.6511
GSE29001 DYNC1LI2 1783 203590_at -0.0196 0.9311
GSE38129 DYNC1LI2 1783 203590_at -0.1507 0.2711
GSE45670 DYNC1LI2 1783 224616_at -0.1743 0.0200
GSE53622 DYNC1LI2 1783 8218 -0.0343 0.6268
GSE53624 DYNC1LI2 1783 8218 -0.2422 0.0036
GSE63941 DYNC1LI2 1783 224616_at -0.8253 0.0391
GSE77861 DYNC1LI2 1783 224616_at 0.3493 0.0769
GSE97050 DYNC1LI2 1783 A_33_P3374758 -0.0555 0.8048
SRP007169 DYNC1LI2 1783 RNAseq 0.2967 0.4158
SRP008496 DYNC1LI2 1783 RNAseq 0.2911 0.1282
SRP064894 DYNC1LI2 1783 RNAseq -0.1651 0.2978
SRP133303 DYNC1LI2 1783 RNAseq 0.2200 0.0570
SRP159526 DYNC1LI2 1783 RNAseq -0.0122 0.9674
SRP193095 DYNC1LI2 1783 RNAseq -0.0744 0.3649
SRP219564 DYNC1LI2 1783 RNAseq -0.4334 0.1305
TCGA DYNC1LI2 1783 RNAseq -0.1695 0.0000

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by DYNC1LI2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of DYNC1LI2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 DYNC1LI2 1783 8 2 20
GSE20123 DYNC1LI2 1783 8 2 20
GSE43470 DYNC1LI2 1783 1 8 34
GSE46452 DYNC1LI2 1783 38 1 20
GSE47630 DYNC1LI2 1783 10 8 22
GSE54993 DYNC1LI2 1783 2 4 64
GSE54994 DYNC1LI2 1783 8 10 35
GSE60625 DYNC1LI2 1783 4 0 7
GSE74703 DYNC1LI2 1783 1 5 30
GSE74704 DYNC1LI2 1783 5 1 14
TCGA DYNC1LI2 1783 31 11 54

Total number of gains: 116; Total number of losses: 52; Total Number of normals: 320.  


 

Somatic mutations of DYNC1LI2:

 

Generating mutation plots.

 

Highly correlated genes for DYNC1LI2:

 

Showing top 20/503 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
DYNC1LI2FAHD10.806194303
DYNC1LI2CHM0.804003303
DYNC1LI2BCAS20.758172303
DYNC1LI2TRIB10.751765303
DYNC1LI2ZNF8300.745221303
DYNC1LI2EDC40.734898303
DYNC1LI2MSL10.731722303
DYNC1LI2HSPA40.722709303
DYNC1LI2RNF1450.716955403
DYNC1LI2GIMAP10.711962303
DYNC1LI2TUBG20.702368303
DYNC1LI2DDIT30.701344403
DYNC1LI2FUNDC20.700484403
DYNC1LI2COG10.696631303
DYNC1LI2JMY0.696228504
DYNC1LI2KLF100.696175403
DYNC1LI2CD440.696122303
DYNC1LI2TRIP120.695184303
DYNC1LI2RGS7BP0.694735303
DYNC1LI2DPM10.694242303

For details and further investigation, click here