HSPA4

 

Full name: heat shock protein family A (Hsp70) member 4 Alias Symbol: HS24/P52|HSPH2
Type: protein-coding gene Cytoband: 5q31.1
Entrez ID: 3308 HGNC ID: HGNC:5237 Ensembl Gene: ENSG00000170606 OMIM ID: 601113
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of HSPA4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HSPA4 3308 211015_s_at -0.0844 0.9297
GSE20347 HSPA4 3308 208815_x_at -0.4898 0.0075
GSE23400 HSPA4 3308 208815_x_at -0.3885 0.0001
GSE26886 HSPA4 3308 208815_x_at -0.4583 0.0253
GSE29001 HSPA4 3308 208815_x_at -0.6473 0.1173
GSE38129 HSPA4 3308 208815_x_at -0.0493 0.8194
GSE45670 HSPA4 3308 208815_x_at 0.0596 0.8210
GSE53622 HSPA4 3308 73834 -0.3552 0.0000
GSE53624 HSPA4 3308 73834 -0.3290 0.0000
GSE63941 HSPA4 3308 208815_x_at -0.1924 0.7253
GSE77861 HSPA4 3308 208815_x_at -0.4406 0.1589
GSE97050 HSPA4 3308 A_24_P377277 -0.2035 0.5091
SRP007169 HSPA4 3308 RNAseq -0.5262 0.2520
SRP008496 HSPA4 3308 RNAseq -0.6166 0.0260
SRP064894 HSPA4 3308 RNAseq -0.6147 0.0001
SRP133303 HSPA4 3308 RNAseq -0.1583 0.3639
SRP159526 HSPA4 3308 RNAseq -0.3373 0.3459
SRP193095 HSPA4 3308 RNAseq -0.5957 0.0000
SRP219564 HSPA4 3308 RNAseq -0.7020 0.0281
TCGA HSPA4 3308 RNAseq 0.0900 0.0522

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by HSPA4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HSPA4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HSPA4 3308 1 11 18
GSE20123 HSPA4 3308 2 11 17
GSE43470 HSPA4 3308 2 9 32
GSE46452 HSPA4 3308 0 27 32
GSE47630 HSPA4 3308 0 21 19
GSE54993 HSPA4 3308 9 1 60
GSE54994 HSPA4 3308 2 16 35
GSE60625 HSPA4 3308 0 0 11
GSE74703 HSPA4 3308 2 6 28
GSE74704 HSPA4 3308 1 5 14
TCGA HSPA4 3308 3 38 55

Total number of gains: 22; Total number of losses: 145; Total Number of normals: 321.  


 

Somatic mutations of HSPA4:

 

Generating mutation plots.

 

Highly correlated genes for HSPA4:

 

Showing top 20/1084 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HSPA4SCRN30.799525303
HSPA4TP53AIP10.788534303
HSPA4FAM122A0.782978303
HSPA4PPIP5K20.782212404
HSPA4C16orf720.772133303
HSPA4HDHD20.762377303
HSPA4MRPL300.749794303
HSPA4UGP20.749065404
HSPA4ARRDC30.746134303
HSPA4RANBP60.740015303
HSPA4PPM1D0.735389303
HSPA4NOXO10.733114303
HSPA4NIPBL0.732957303
HSPA4SLC4A1AP0.73207303
HSPA4DYNC1LI20.722709303
HSPA4EBPL0.721763303
HSPA4ZNF910.721218303
HSPA4COG60.715666303
HSPA4PPP2CA0.71491213012
HSPA4GSKIP0.7127505

For details and further investigation, click here