EBI3

 

Full name: Epstein-Barr virus induced 3 Alias Symbol: IL27B|IL35B
Type: protein-coding gene Cytoband: 19p13.3
Entrez ID: 10148 HGNC ID: HGNC:3129 Ensembl Gene: ENSG00000105246 OMIM ID: 605816
Drug and gene relationship at DGIdb

 

Expression of EBI3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EBI3 10148 219424_at 0.0208 0.9797
GSE20347 EBI3 10148 219424_at 0.0014 0.9918
GSE23400 EBI3 10148 219424_at -0.1297 0.0004
GSE26886 EBI3 10148 219424_at 0.5159 0.0015
GSE29001 EBI3 10148 219424_at 0.0900 0.5931
GSE38129 EBI3 10148 219424_at -0.0188 0.8791
GSE45670 EBI3 10148 219424_at -0.0011 0.9948
GSE53622 EBI3 10148 92045 0.2697 0.2999
GSE53624 EBI3 10148 92045 0.0138 0.9592
GSE63941 EBI3 10148 219424_at 0.2576 0.4629
GSE77861 EBI3 10148 219424_at -0.2158 0.0421
SRP133303 EBI3 10148 RNAseq 0.1709 0.6446
SRP219564 EBI3 10148 RNAseq 1.1358 0.0317
TCGA EBI3 10148 RNAseq 0.1411 0.6664

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by EBI3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EBI3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EBI3 10148 5 3 22
GSE20123 EBI3 10148 4 2 24
GSE43470 EBI3 10148 1 8 34
GSE46452 EBI3 10148 47 1 11
GSE47630 EBI3 10148 5 7 28
GSE54993 EBI3 10148 16 3 51
GSE54994 EBI3 10148 6 16 31
GSE60625 EBI3 10148 9 0 2
GSE74703 EBI3 10148 1 5 30
GSE74704 EBI3 10148 1 2 17
TCGA EBI3 10148 11 18 67

Total number of gains: 106; Total number of losses: 65; Total Number of normals: 317.  


 

Somatic mutations of EBI3:

 

Generating mutation plots.

 

Highly correlated genes for EBI3:

 

Showing top 20/331 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EBI3MPEG10.81111303
EBI3GPR340.779157303
EBI3ITGAM0.732632404
EBI3RGS180.730516403
EBI3AOAH0.706615403
EBI3TNFAIP8L20.699525403
EBI3RAB39B0.693436303
EBI3BTLA0.689855303
EBI3GNGT20.68357404
EBI3GIMAP20.679664403
EBI3HLA-DPB10.679599403
EBI3HVCN10.674769303
EBI3IL2RG0.667104705
EBI3KLRB10.665943404
EBI3FAM104B0.66432303
EBI3C16orf540.662192403
EBI3PIK3CG0.65986605
EBI3HCLS10.659612504
EBI3PLCL20.658963504
EBI3CD50.658125605

For details and further investigation, click here