EPHA4

 

Full name: EPH receptor A4 Alias Symbol: Hek8
Type: protein-coding gene Cytoband: 2q36.1
Entrez ID: 2043 HGNC ID: HGNC:3388 Ensembl Gene: ENSG00000116106 OMIM ID: 602188
Drug and gene relationship at DGIdb

 

EPHA4 involved pathways:

KEGG pathway Description View
hsa04360Axon guidance

 

Expression of EPHA4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EPHA4 2043 229374_at -0.0641 0.9337
GSE20347 EPHA4 2043 206114_at 0.0139 0.9636
GSE23400 EPHA4 2043 206114_at -0.0120 0.8287
GSE26886 EPHA4 2043 227449_at -0.2375 0.7390
GSE29001 EPHA4 2043 206114_at 0.2047 0.6887
GSE38129 EPHA4 2043 206114_at 0.1095 0.6509
GSE45670 EPHA4 2043 227449_at 0.8705 0.0149
GSE53622 EPHA4 2043 56499 0.7986 0.0000
GSE53624 EPHA4 2043 56499 0.6020 0.0000
GSE63941 EPHA4 2043 229374_at -0.2806 0.6841
GSE77861 EPHA4 2043 206114_at 0.6540 0.0353
GSE97050 EPHA4 2043 A_23_P108501 -0.2667 0.6563
SRP007169 EPHA4 2043 RNAseq 0.4188 0.4667
SRP008496 EPHA4 2043 RNAseq 0.7508 0.1090
SRP064894 EPHA4 2043 RNAseq 0.2237 0.4954
SRP133303 EPHA4 2043 RNAseq 1.1697 0.0034
SRP159526 EPHA4 2043 RNAseq 0.6941 0.0031
SRP193095 EPHA4 2043 RNAseq 0.4356 0.0736
SRP219564 EPHA4 2043 RNAseq 0.2930 0.6676
TCGA EPHA4 2043 RNAseq 0.1253 0.4243

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by EPHA4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EPHA4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EPHA4 2043 2 13 15
GSE20123 EPHA4 2043 2 13 15
GSE43470 EPHA4 2043 0 7 36
GSE46452 EPHA4 2043 0 5 54
GSE47630 EPHA4 2043 4 5 31
GSE54993 EPHA4 2043 1 2 67
GSE54994 EPHA4 2043 7 10 36
GSE60625 EPHA4 2043 0 3 8
GSE74703 EPHA4 2043 0 6 30
GSE74704 EPHA4 2043 2 7 11
TCGA EPHA4 2043 12 26 58

Total number of gains: 30; Total number of losses: 97; Total Number of normals: 361.  


 

Somatic mutations of EPHA4:

 

Generating mutation plots.

 

Highly correlated genes for EPHA4:

 

Showing top 20/103 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EPHA4CNTN10.701334303
EPHA4GDAP10.689131303
EPHA4FAU0.687675303
EPHA4UBE3C0.682038303
EPHA4ZFR0.676654303
EPHA4PPP2R3C0.662178303
EPHA4UNC45A0.662171303
EPHA4DNAJC190.661716303
EPHA4TSPAN30.660564303
EPHA4SKA20.655393303
EPHA4MIPOL10.652415303
EPHA4NDUFA80.648259303
EPHA4ITM2C0.640056303
EPHA4KAT50.639962303
EPHA4CDC14B0.638899303
EPHA4FOXQ10.638237303
EPHA4PAQR30.637495303
EPHA4DUSP280.636893303
EPHA4CSTF2T0.636569303
EPHA4AGAP10.636408403

For details and further investigation, click here