ERCC4

 

Full name: ERCC excision repair 4, endonuclease catalytic subunit Alias Symbol: RAD1|FANCQ
Type: protein-coding gene Cytoband: 16p13.12
Entrez ID: 2072 HGNC ID: HGNC:3436 Ensembl Gene: ENSG00000175595 OMIM ID: 133520
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of ERCC4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ERCC4 2072 210158_at 0.2725 0.4702
GSE20347 ERCC4 2072 210158_at 0.0144 0.8969
GSE23400 ERCC4 2072 210158_at -0.0145 0.7267
GSE26886 ERCC4 2072 235215_at -0.5291 0.0821
GSE29001 ERCC4 2072 210158_at -0.0233 0.8973
GSE38129 ERCC4 2072 210158_at -0.1110 0.2776
GSE45670 ERCC4 2072 235215_at 0.6644 0.0012
GSE53622 ERCC4 2072 63415 0.5854 0.0000
GSE53624 ERCC4 2072 63415 0.7210 0.0000
GSE63941 ERCC4 2072 235215_at -0.6260 0.1630
GSE77861 ERCC4 2072 210158_at -0.1250 0.3190
GSE97050 ERCC4 2072 A_33_P3243364 0.3533 0.2824
SRP007169 ERCC4 2072 RNAseq 0.8876 0.0365
SRP008496 ERCC4 2072 RNAseq 1.2909 0.0000
SRP064894 ERCC4 2072 RNAseq 0.3624 0.0667
SRP133303 ERCC4 2072 RNAseq 0.5900 0.0000
SRP159526 ERCC4 2072 RNAseq 0.3256 0.2874
SRP193095 ERCC4 2072 RNAseq 0.3370 0.0000
SRP219564 ERCC4 2072 RNAseq 0.1916 0.5092
TCGA ERCC4 2072 RNAseq -0.0755 0.2067

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by ERCC4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ERCC4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ERCC4 2072 5 4 21
GSE20123 ERCC4 2072 5 3 22
GSE43470 ERCC4 2072 3 2 38
GSE46452 ERCC4 2072 38 1 20
GSE47630 ERCC4 2072 14 6 20
GSE54993 ERCC4 2072 3 5 62
GSE54994 ERCC4 2072 5 9 39
GSE60625 ERCC4 2072 4 0 7
GSE74703 ERCC4 2072 3 2 31
GSE74704 ERCC4 2072 2 1 17
TCGA ERCC4 2072 20 11 65

Total number of gains: 102; Total number of losses: 44; Total Number of normals: 342.  


 

Somatic mutations of ERCC4:

 

Generating mutation plots.

 

Highly correlated genes for ERCC4:

 

Showing top 20/417 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ERCC4SMOX0.7794303
ERCC4PRLR0.773446404
ERCC4REL0.7563303
ERCC4CYSLTR20.74071505
ERCC4CELA3A0.73535303
ERCC4PWWP2A0.723106303
ERCC4SRFBP10.721152303
ERCC4CDYL20.717291403
ERCC4NAA600.711428303
ERCC4HIBADH0.705747303
ERCC4KIR2DS20.704118505
ERCC4DSE0.703302303
ERCC4TAOK10.702765505
ERCC4UBLCP10.701902303
ERCC4ADCY70.70071303
ERCC4RNASEL0.700288404
ERCC4CARHSP10.696118303
ERCC4GPA330.691038505
ERCC4MED240.688539505
ERCC4GDF50.688116605

For details and further investigation, click here