FAM160A1

 

Full name: family with sequence similarity 160 member A1 Alias Symbol: FLJ43373
Type: protein-coding gene Cytoband: 4q31.3
Entrez ID: 729830 HGNC ID: HGNC:34237 Ensembl Gene: ENSG00000164142 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of FAM160A1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM160A1 729830 242687_at -0.2247 0.7765
GSE26886 FAM160A1 729830 242687_at -1.0582 0.0000
GSE45670 FAM160A1 729830 242687_at -0.0226 0.9066
GSE53622 FAM160A1 729830 52882 -0.7755 0.0000
GSE53624 FAM160A1 729830 52882 -1.0348 0.0000
GSE63941 FAM160A1 729830 242687_at 0.4760 0.0028
GSE77861 FAM160A1 729830 242687_at -0.1553 0.1903
GSE97050 FAM160A1 729830 A_24_P912366 0.1209 0.8730
SRP007169 FAM160A1 729830 RNAseq -1.9544 0.0002
SRP008496 FAM160A1 729830 RNAseq -1.7490 0.0000
SRP064894 FAM160A1 729830 RNAseq -1.5255 0.0000
SRP133303 FAM160A1 729830 RNAseq -0.4268 0.0525
SRP159526 FAM160A1 729830 RNAseq -1.0080 0.0003
SRP193095 FAM160A1 729830 RNAseq -0.5116 0.0171
SRP219564 FAM160A1 729830 RNAseq -1.3814 0.0694
TCGA FAM160A1 729830 RNAseq 0.1517 0.2769

Upregulated datasets: 0; Downregulated datasets: 6.  


 

Survival by FAM160A1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FAM160A1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM160A1 729830 1 13 16
GSE20123 FAM160A1 729830 1 13 16
GSE43470 FAM160A1 729830 0 14 29
GSE46452 FAM160A1 729830 1 36 22
GSE47630 FAM160A1 729830 0 23 17
GSE54993 FAM160A1 729830 10 0 60
GSE54994 FAM160A1 729830 1 13 39
GSE60625 FAM160A1 729830 0 1 10
GSE74703 FAM160A1 729830 0 12 24
GSE74704 FAM160A1 729830 0 7 13
TCGA FAM160A1 729830 10 35 51

Total number of gains: 24; Total number of losses: 167; Total Number of normals: 297.  


 

Somatic mutations of FAM160A1:

 

Generating mutation plots.

 

Highly correlated genes for FAM160A1:

 

Showing top 20/1036 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM160A1NIPAL10.825099303
FAM160A1ARAP20.793899303
FAM160A1TMEM1540.780889707
FAM160A1CTNND10.762313303
FAM160A1MAL20.755945707
FAM160A1MARVELD20.753919404
FAM160A1S100A160.750925707
FAM160A1HOOK10.74769505
FAM160A1GRHL10.746365808
FAM160A1EVPL0.746213808
FAM160A1IL20RB0.742816606
FAM160A1VAMP80.741229707
FAM160A1SPRR2D0.738302303
FAM160A1UPK3B0.735111303
FAM160A1NCCRP10.729655303
FAM160A1MPZL30.728203808
FAM160A1ARHGAP320.727184707
FAM160A1FDXR0.726838303
FAM160A1EPGN0.726091303
FAM160A1NUAK20.725499303

For details and further investigation, click here