FAM98A

 

Full name: family with sequence similarity 98 member A Alias Symbol: DKFZP564F0522
Type: protein-coding gene Cytoband: 2p22.3
Entrez ID: 25940 HGNC ID: HGNC:24520 Ensembl Gene: ENSG00000119812 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of FAM98A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM98A 25940 212333_at 0.2148 0.5327
GSE20347 FAM98A 25940 212333_at -0.1439 0.3814
GSE23400 FAM98A 25940 212333_at 0.1013 0.1467
GSE26886 FAM98A 25940 212333_at -0.8246 0.0003
GSE29001 FAM98A 25940 212333_at 0.0366 0.9084
GSE38129 FAM98A 25940 212333_at -0.1329 0.2882
GSE45670 FAM98A 25940 212333_at 0.2287 0.0789
GSE53622 FAM98A 25940 17064 0.0095 0.8955
GSE53624 FAM98A 25940 17064 0.0080 0.8727
GSE63941 FAM98A 25940 212333_at -1.3173 0.0335
GSE77861 FAM98A 25940 212333_at 0.0725 0.7777
GSE97050 FAM98A 25940 A_23_P313728 0.1243 0.6650
SRP007169 FAM98A 25940 RNAseq 0.5473 0.1933
SRP008496 FAM98A 25940 RNAseq 0.4881 0.0510
SRP064894 FAM98A 25940 RNAseq 0.1143 0.3583
SRP133303 FAM98A 25940 RNAseq 0.1575 0.2956
SRP159526 FAM98A 25940 RNAseq -0.0753 0.7469
SRP193095 FAM98A 25940 RNAseq -0.2188 0.0218
SRP219564 FAM98A 25940 RNAseq 0.1309 0.7273
TCGA FAM98A 25940 RNAseq -0.0383 0.4293

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by FAM98A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FAM98A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM98A 25940 10 1 19
GSE20123 FAM98A 25940 9 1 20
GSE43470 FAM98A 25940 3 1 39
GSE46452 FAM98A 25940 2 4 53
GSE47630 FAM98A 25940 7 0 33
GSE54993 FAM98A 25940 0 5 65
GSE54994 FAM98A 25940 10 0 43
GSE60625 FAM98A 25940 0 3 8
GSE74703 FAM98A 25940 3 0 33
GSE74704 FAM98A 25940 9 1 10
TCGA FAM98A 25940 36 3 57

Total number of gains: 89; Total number of losses: 19; Total Number of normals: 380.  


 

Somatic mutations of FAM98A:

 

Generating mutation plots.

 

Highly correlated genes for FAM98A:

 

Showing top 20/299 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM98AZNF5470.784757303
FAM98ACHD10.763043303
FAM98AACAA10.758606303
FAM98APDLIM20.755722303
FAM98AMZT10.742338303
FAM98AARL100.739596303
FAM98ANFASC0.736052303
FAM98AKIF3A0.735119303
FAM98ASTXBP50.730686303
FAM98AASF1A0.724541303
FAM98ATSC22D20.720689403
FAM98ANUFIP20.719296303
FAM98AFBXW20.717078303
FAM98AMED290.716733303
FAM98ATANC10.710955303
FAM98ARRAD0.70808303
FAM98AACAA20.707545303
FAM98AMPP60.705039404
FAM98ACNOT40.700988303
FAM98ASLC15A40.700068303

For details and further investigation, click here