| Full name: FOXN3 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 14q32.11 | ||
| Entrez ID: 400236 | HGNC ID: HGNC:44290 | Ensembl Gene: ENSG00000258920 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of FOXN3-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | FOXN3-AS1 | 400236 | 227887_at | -0.4739 | 0.2968 | |
| GSE26886 | FOXN3-AS1 | 400236 | 227887_at | -0.3783 | 0.0718 | |
| GSE45670 | FOXN3-AS1 | 400236 | 227887_at | 0.1378 | 0.4847 | |
| GSE53622 | FOXN3-AS1 | 400236 | 79356 | -0.3117 | 0.0294 | |
| GSE53624 | FOXN3-AS1 | 400236 | 79356 | -0.2993 | 0.0030 | |
| GSE63941 | FOXN3-AS1 | 400236 | 227887_at | 0.0181 | 0.9798 | |
| GSE77861 | FOXN3-AS1 | 400236 | 227885_at | 0.0439 | 0.8295 | |
| SRP007169 | FOXN3-AS1 | 400236 | RNAseq | -1.2587 | 0.0196 | |
| SRP064894 | FOXN3-AS1 | 400236 | RNAseq | 0.4207 | 0.3219 | |
| SRP133303 | FOXN3-AS1 | 400236 | RNAseq | -0.3439 | 0.0777 | |
| SRP159526 | FOXN3-AS1 | 400236 | RNAseq | 0.1168 | 0.8112 | |
| SRP193095 | FOXN3-AS1 | 400236 | RNAseq | -0.7075 | 0.0003 | |
| SRP219564 | FOXN3-AS1 | 400236 | RNAseq | -0.5980 | 0.0495 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by FOXN3-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of FOXN3-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | FOXN3-AS1 | 400236 | 8 | 5 | 17 | |
| GSE20123 | FOXN3-AS1 | 400236 | 8 | 5 | 17 | |
| GSE43470 | FOXN3-AS1 | 400236 | 7 | 3 | 33 | |
| GSE46452 | FOXN3-AS1 | 400236 | 16 | 3 | 40 | |
| GSE47630 | FOXN3-AS1 | 400236 | 11 | 8 | 21 | |
| GSE54993 | FOXN3-AS1 | 400236 | 3 | 8 | 59 | |
| GSE54994 | FOXN3-AS1 | 400236 | 19 | 4 | 30 | |
| GSE60625 | FOXN3-AS1 | 400236 | 0 | 2 | 9 | |
| GSE74703 | FOXN3-AS1 | 400236 | 6 | 3 | 27 | |
| GSE74704 | FOXN3-AS1 | 400236 | 4 | 4 | 12 |
Total number of gains: 82; Total number of losses: 45; Total Number of normals: 265.
Somatic mutations of FOXN3-AS1:
Generating mutation plots.
Highly correlated genes for FOXN3-AS1:
Showing top 20/41 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| FOXN3-AS1 | TUBA4A | 0.676721 | 3 | 0 | 3 |
| FOXN3-AS1 | PLA2G3 | 0.645277 | 3 | 0 | 3 |
| FOXN3-AS1 | SAR1B | 0.619229 | 4 | 0 | 4 |
| FOXN3-AS1 | RILP | 0.612539 | 4 | 0 | 3 |
| FOXN3-AS1 | TOX4 | 0.603569 | 4 | 0 | 3 |
| FOXN3-AS1 | TRIP4 | 0.592874 | 3 | 0 | 3 |
| FOXN3-AS1 | RPUSD3 | 0.582152 | 3 | 0 | 3 |
| FOXN3-AS1 | RABGGTA | 0.581952 | 5 | 0 | 4 |
| FOXN3-AS1 | BDKRB1 | 0.581677 | 5 | 0 | 4 |
| FOXN3-AS1 | SLC35F6 | 0.576628 | 4 | 0 | 3 |
| FOXN3-AS1 | CLTB | 0.570328 | 4 | 0 | 3 |
| FOXN3-AS1 | ATP10D | 0.568386 | 4 | 0 | 3 |
| FOXN3-AS1 | CARD14 | 0.56748 | 3 | 0 | 3 |
| FOXN3-AS1 | BDKRB2 | 0.563071 | 6 | 0 | 3 |
| FOXN3-AS1 | MARK3 | 0.561819 | 4 | 0 | 3 |
| FOXN3-AS1 | RBKS | 0.559354 | 3 | 0 | 3 |
| FOXN3-AS1 | DAAM1 | 0.555771 | 4 | 0 | 3 |
| FOXN3-AS1 | LAD1 | 0.548999 | 4 | 0 | 3 |
| FOXN3-AS1 | VTI1B | 0.547669 | 4 | 0 | 3 |
| FOXN3-AS1 | ARHGAP5-AS1 | 0.547008 | 6 | 0 | 3 |
For details and further investigation, click here
