Full name: gigaxonin | Alias Symbol: GAN1|KLHL16 | ||
Type: protein-coding gene | Cytoband: 16q23.2 | ||
Entrez ID: 8139 | HGNC ID: HGNC:4137 | Ensembl Gene: ENSG00000261609 | OMIM ID: 605379 |
Drug and gene relationship at DGIdb |
Expression of GAN:
Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
---|---|---|---|---|---|---|
GSE17351 | GAN | 8139 | 228567_at | 0.1849 | 0.6469 | |
GSE20347 | GAN | 8139 | 220124_at | -0.3668 | 0.0133 | |
GSE23400 | GAN | 8139 | 220124_at | -0.0515 | 0.1149 | |
GSE26886 | GAN | 8139 | 228567_at | -0.8157 | 0.0015 | |
GSE29001 | GAN | 8139 | 220124_at | -0.2931 | 0.4517 | |
GSE38129 | GAN | 8139 | 220124_at | -0.0482 | 0.8313 | |
GSE45670 | GAN | 8139 | 228567_at | -0.1303 | 0.5907 | |
GSE53622 | GAN | 8139 | 138116 | -0.6034 | 0.0000 | |
GSE53624 | GAN | 8139 | 138116 | -0.5477 | 0.0000 | |
GSE63941 | GAN | 8139 | 228567_at | 0.3926 | 0.3847 | |
GSE77861 | GAN | 8139 | 228567_at | -0.1682 | 0.6971 | |
GSE97050 | GAN | 8139 | A_23_P88873 | -0.0310 | 0.9238 | |
SRP007169 | GAN | 8139 | RNAseq | -0.2439 | 0.6681 | |
SRP008496 | GAN | 8139 | RNAseq | -0.1472 | 0.6749 | |
SRP064894 | GAN | 8139 | RNAseq | -1.2335 | 0.0018 | |
SRP133303 | GAN | 8139 | RNAseq | -0.5463 | 0.0005 | |
SRP159526 | GAN | 8139 | RNAseq | -0.0432 | 0.9367 | |
SRP193095 | GAN | 8139 | RNAseq | -0.7881 | 0.0000 | |
SRP219564 | GAN | 8139 | RNAseq | -1.0558 | 0.0822 | |
TCGA | GAN | 8139 | RNAseq | 0.0295 | 0.8020 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by GAN expression:
Note: Click image to view full size file.
Copy number change of GAN:
Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
---|---|---|---|---|---|---|
GSE15526 | GAN | 8139 | 5 | 3 | 22 | |
GSE20123 | GAN | 8139 | 5 | 3 | 22 | |
GSE43470 | GAN | 8139 | 2 | 8 | 33 | |
GSE46452 | GAN | 8139 | 37 | 2 | 20 | |
GSE47630 | GAN | 8139 | 11 | 9 | 20 | |
GSE54993 | GAN | 8139 | 2 | 4 | 64 | |
GSE54994 | GAN | 8139 | 7 | 10 | 36 | |
GSE60625 | GAN | 8139 | 4 | 0 | 7 | |
GSE74703 | GAN | 8139 | 2 | 6 | 28 | |
GSE74704 | GAN | 8139 | 3 | 2 | 15 | |
TCGA | GAN | 8139 | 25 | 16 | 55 |
Total number of gains: 103; Total number of losses: 63; Total Number of normals: 322.
Somatic mutations of GAN:
Generating mutation plots.
Highly correlated genes for GAN:
Showing top 20/704 corelated genes with mean PCC>0.5.
Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
---|---|---|---|---|---|
GAN | CPEB4 | 0.703905 | 3 | 0 | 3 |
GAN | PITHD1 | 0.685664 | 4 | 0 | 4 |
GAN | OSBPL8 | 0.684142 | 3 | 0 | 3 |
GAN | ELOVL1 | 0.683756 | 3 | 0 | 3 |
GAN | CAPNS2 | 0.668855 | 4 | 0 | 4 |
GAN | RAB8A | 0.66422 | 3 | 0 | 3 |
GAN | NPC1 | 0.660019 | 3 | 0 | 3 |
GAN | STXBP5 | 0.65895 | 5 | 0 | 4 |
GAN | CTTNBP2NL | 0.654402 | 4 | 0 | 4 |
GAN | METRNL | 0.653765 | 4 | 0 | 4 |
GAN | SLC22A15 | 0.653311 | 3 | 0 | 3 |
GAN | PSMD5 | 0.652034 | 4 | 0 | 4 |
GAN | TAX1BP3 | 0.645157 | 3 | 0 | 3 |
GAN | GRPEL2 | 0.639921 | 4 | 0 | 3 |
GAN | NIP7 | 0.632761 | 5 | 0 | 5 |
GAN | JAG1 | 0.631733 | 4 | 0 | 3 |
GAN | HK1 | 0.628941 | 8 | 0 | 8 |
GAN | PPP2R2C | 0.628282 | 4 | 0 | 4 |
GAN | GSDMC | 0.626959 | 5 | 0 | 4 |
GAN | ABLIM2 | 0.623926 | 4 | 0 | 4 |
For details and further investigation, click here