GSN-AS1

 

Full name: GSN antisense RNA 1 Alias Symbol: MOST2
Type: non-coding RNA Cytoband: 9q33.2
Entrez ID: 57000 HGNC ID: HGNC:23372 Ensembl Gene: ENSG00000235865 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of GSN-AS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GSN-AS1 57000 221072_at -0.3386 0.2254
GSE20347 GSN-AS1 57000 221072_at -0.2110 0.0119
GSE23400 GSN-AS1 57000 221072_at -0.2584 0.0000
GSE26886 GSN-AS1 57000 221072_at -0.1463 0.1652
GSE29001 GSN-AS1 57000 221072_at -0.3870 0.0055
GSE38129 GSN-AS1 57000 221072_at -0.2223 0.0032
GSE45670 GSN-AS1 57000 221072_at -0.0998 0.3267
GSE53622 GSN-AS1 57000 45060 -0.3902 0.0000
GSE53624 GSN-AS1 57000 45060 -0.4753 0.0000
GSE63941 GSN-AS1 57000 221072_at 0.0478 0.7909
GSE77861 GSN-AS1 57000 221072_at -0.2319 0.0344
SRP007169 GSN-AS1 57000 RNAseq 3.5624 0.0036
SRP064894 GSN-AS1 57000 RNAseq 0.0745 0.8007
SRP133303 GSN-AS1 57000 RNAseq -0.0383 0.8585
SRP159526 GSN-AS1 57000 RNAseq 0.1829 0.6180
SRP193095 GSN-AS1 57000 RNAseq -0.1769 0.3622
SRP219564 GSN-AS1 57000 RNAseq 0.0547 0.9027

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by GSN-AS1 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of GSN-AS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GSN-AS1 57000 3 7 20
GSE20123 GSN-AS1 57000 3 7 20
GSE43470 GSN-AS1 57000 5 4 34
GSE46452 GSN-AS1 57000 6 13 40
GSE47630 GSN-AS1 57000 3 16 21
GSE54993 GSN-AS1 57000 3 3 64
GSE54994 GSN-AS1 57000 9 10 34
GSE60625 GSN-AS1 57000 0 0 11
GSE74703 GSN-AS1 57000 5 3 28
GSE74704 GSN-AS1 57000 2 5 13

Total number of gains: 39; Total number of losses: 68; Total Number of normals: 285.  


 

Somatic mutations of GSN-AS1:

 

Generating mutation plots.

 

Highly correlated genes for GSN-AS1:

 

Showing top 20/888 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GSN-AS1ZNF8350.736554303
GSN-AS1PTPRN20.699874404
GSN-AS1SYT130.692396303
GSN-AS1SELP0.69131303
GSN-AS1PFKFB20.688211505
GSN-AS1CTRC0.6854404
GSN-AS1P2RX60.682211404
GSN-AS1FSHR0.68027505
GSN-AS1COX6A20.680031605
GSN-AS1NPHS20.675778504
GSN-AS1NR0B20.675674303
GSN-AS1MASP10.675572504
GSN-AS1ACR0.670707404
GSN-AS1C3orf360.668794504
GSN-AS1MAML30.668791504
GSN-AS1SYT50.666862303
GSN-AS1AMACR0.662197505
GSN-AS1UBQLN30.659956505
GSN-AS1E2F40.659018504
GSN-AS1GH20.6582705

For details and further investigation, click here