GSPT1

 

Full name: G1 to S phase transition 1 Alias Symbol: GST1|ETF3A|eRF3a
Type: protein-coding gene Cytoband: 16p13.13
Entrez ID: 2935 HGNC ID: HGNC:4621 Ensembl Gene: ENSG00000103342 OMIM ID: 139259
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of GSPT1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GSPT1 2935 215438_x_at 0.3138 0.6076
GSE20347 GSPT1 2935 215438_x_at 0.1201 0.4410
GSE23400 GSPT1 2935 215438_x_at 0.5661 0.0000
GSE26886 GSPT1 2935 215438_x_at 0.1109 0.4617
GSE29001 GSPT1 2935 215438_x_at 0.0058 0.9833
GSE38129 GSPT1 2935 215438_x_at 0.4624 0.0064
GSE45670 GSPT1 2935 215438_x_at 0.3719 0.0058
GSE53622 GSPT1 2935 66411 -0.0887 0.0729
GSE53624 GSPT1 2935 66411 0.0520 0.5272
GSE63941 GSPT1 2935 215438_x_at 0.4021 0.1853
GSE77861 GSPT1 2935 215438_x_at 0.0093 0.9805
GSE97050 GSPT1 2935 A_24_P73669 -0.2438 0.6281
SRP007169 GSPT1 2935 RNAseq -0.3984 0.2283
SRP008496 GSPT1 2935 RNAseq -0.1823 0.3597
SRP064894 GSPT1 2935 RNAseq -0.3975 0.0037
SRP133303 GSPT1 2935 RNAseq 0.2413 0.1147
SRP159526 GSPT1 2935 RNAseq -0.2346 0.5392
SRP193095 GSPT1 2935 RNAseq -0.1770 0.0360
SRP219564 GSPT1 2935 RNAseq -0.4104 0.0858
TCGA GSPT1 2935 RNAseq -0.0431 0.2809

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by GSPT1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GSPT1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GSPT1 2935 4 4 22
GSE20123 GSPT1 2935 4 3 23
GSE43470 GSPT1 2935 3 3 37
GSE46452 GSPT1 2935 38 1 20
GSE47630 GSPT1 2935 14 6 20
GSE54993 GSPT1 2935 3 5 62
GSE54994 GSPT1 2935 5 9 39
GSE60625 GSPT1 2935 4 0 7
GSE74703 GSPT1 2935 3 2 31
GSE74704 GSPT1 2935 2 1 17
TCGA GSPT1 2935 22 12 62

Total number of gains: 102; Total number of losses: 46; Total Number of normals: 340.  


 

Somatic mutations of GSPT1:

 

Generating mutation plots.

 

Highly correlated genes for GSPT1:

 

Showing top 20/860 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GSPT1GMCL10.777463303
GSPT1RBM70.765563303
GSPT1MVP0.760608303
GSPT1PSPC10.747586303
GSPT1GSR0.738664303
GSPT1TUFM0.737649808
GSPT1TMEM600.733283303
GSPT1LAMTOR10.727102303
GSPT1TRAF70.724988404
GSPT1MRPL370.72448404
GSPT1INTS120.715674303
GSPT1PPP1R80.714547403
GSPT1TTC39B0.711029303
GSPT1CEBPZ0.707243303
GSPT1TBCC0.70144303
GSPT1FGGY0.700588303
GSPT1CISD10.698648404
GSPT1GTF3C40.698066404
GSPT1CHCHD50.697693303
GSPT1NMI0.696959303

For details and further investigation, click here