| Full name: tetratricopeptide repeat domain 39B | Alias Symbol: FLJ33868 | ||
| Type: protein-coding gene | Cytoband: 9p22.3 | ||
| Entrez ID: 158219 | HGNC ID: HGNC:23704 | Ensembl Gene: ENSG00000155158 | OMIM ID: 613574 |
| Drug and gene relationship at DGIdb | |||
Expression of TTC39B:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TTC39B | 158219 | 242477_at | -0.1893 | 0.7951 | |
| GSE26886 | TTC39B | 158219 | 242477_at | -0.4751 | 0.0158 | |
| GSE45670 | TTC39B | 158219 | 232000_at | 0.1868 | 0.5198 | |
| GSE53622 | TTC39B | 158219 | 89164 | -0.7134 | 0.0000 | |
| GSE53624 | TTC39B | 158219 | 89164 | -0.5476 | 0.0000 | |
| GSE63941 | TTC39B | 158219 | 242477_at | -0.3152 | 0.7583 | |
| GSE77861 | TTC39B | 158219 | 242477_at | -0.2538 | 0.2201 | |
| GSE97050 | TTC39B | 158219 | A_33_P3378737 | 0.2578 | 0.4613 | |
| SRP007169 | TTC39B | 158219 | RNAseq | -0.0787 | 0.8889 | |
| SRP008496 | TTC39B | 158219 | RNAseq | -0.0857 | 0.8249 | |
| SRP064894 | TTC39B | 158219 | RNAseq | -0.2559 | 0.3522 | |
| SRP133303 | TTC39B | 158219 | RNAseq | 0.0118 | 0.9544 | |
| SRP159526 | TTC39B | 158219 | RNAseq | -0.3131 | 0.5552 | |
| SRP193095 | TTC39B | 158219 | RNAseq | -0.5326 | 0.0001 | |
| SRP219564 | TTC39B | 158219 | RNAseq | -0.7875 | 0.0944 | |
| TCGA | TTC39B | 158219 | RNAseq | -0.0993 | 0.3814 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TTC39B expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TTC39B:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TTC39B | 158219 | 2 | 16 | 12 | |
| GSE20123 | TTC39B | 158219 | 2 | 16 | 12 | |
| GSE43470 | TTC39B | 158219 | 5 | 11 | 27 | |
| GSE46452 | TTC39B | 158219 | 2 | 23 | 34 | |
| GSE47630 | TTC39B | 158219 | 4 | 26 | 10 | |
| GSE54993 | TTC39B | 158219 | 6 | 3 | 61 | |
| GSE54994 | TTC39B | 158219 | 10 | 16 | 27 | |
| GSE60625 | TTC39B | 158219 | 0 | 0 | 11 | |
| GSE74703 | TTC39B | 158219 | 5 | 8 | 23 | |
| GSE74704 | TTC39B | 158219 | 0 | 13 | 7 | |
| TCGA | TTC39B | 158219 | 14 | 49 | 33 |
Total number of gains: 50; Total number of losses: 181; Total Number of normals: 257.
Somatic mutations of TTC39B:
Generating mutation plots.
Highly correlated genes for TTC39B:
Showing top 20/446 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TTC39B | MCTS1 | 0.815591 | 3 | 0 | 3 |
| TTC39B | ZMYM2 | 0.801207 | 3 | 0 | 3 |
| TTC39B | CLPX | 0.78546 | 4 | 0 | 4 |
| TTC39B | MIOS | 0.77949 | 3 | 0 | 3 |
| TTC39B | COG6 | 0.778821 | 3 | 0 | 3 |
| TTC39B | EIF4E2 | 0.777026 | 3 | 0 | 3 |
| TTC39B | PRRC1 | 0.772413 | 3 | 0 | 3 |
| TTC39B | IL10RB | 0.764105 | 4 | 0 | 4 |
| TTC39B | MED8 | 0.756944 | 4 | 0 | 4 |
| TTC39B | DHDDS | 0.754964 | 3 | 0 | 3 |
| TTC39B | HUS1 | 0.752174 | 3 | 0 | 3 |
| TTC39B | PPIP5K2 | 0.751167 | 3 | 0 | 3 |
| TTC39B | GRPEL1 | 0.748326 | 3 | 0 | 3 |
| TTC39B | C1orf56 | 0.745542 | 3 | 0 | 3 |
| TTC39B | VAMP7 | 0.7444 | 3 | 0 | 3 |
| TTC39B | PSMD7 | 0.740494 | 3 | 0 | 3 |
| TTC39B | MRPL44 | 0.736876 | 3 | 0 | 3 |
| TTC39B | SLC25A46 | 0.736765 | 4 | 0 | 3 |
| TTC39B | LRRC28 | 0.725206 | 3 | 0 | 3 |
| TTC39B | MED4 | 0.716272 | 3 | 0 | 3 |
For details and further investigation, click here
