HELQ

 

Full name: helicase, POLQ like Alias Symbol: Hel308
Type: protein-coding gene Cytoband: 4q21.23
Entrez ID: 113510 HGNC ID: HGNC:18536 Ensembl Gene: ENSG00000163312 OMIM ID: 606769
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of HELQ:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HELQ 113510 228736_at -0.1306 0.8018
GSE26886 HELQ 113510 228736_at -0.2377 0.4120
GSE45670 HELQ 113510 228736_at -0.2549 0.0874
GSE53622 HELQ 113510 94232 -0.3226 0.0001
GSE53624 HELQ 113510 94232 -0.2443 0.0003
GSE63941 HELQ 113510 1554342_s_at -0.0710 0.8720
GSE77861 HELQ 113510 1554342_s_at -0.4458 0.0029
GSE97050 HELQ 113510 A_23_P92614 0.0818 0.7416
SRP007169 HELQ 113510 RNAseq -1.2970 0.0028
SRP008496 HELQ 113510 RNAseq -1.0841 0.0000
SRP064894 HELQ 113510 RNAseq -0.4340 0.0006
SRP133303 HELQ 113510 RNAseq -0.0258 0.7881
SRP159526 HELQ 113510 RNAseq -0.4080 0.0522
SRP193095 HELQ 113510 RNAseq -0.2017 0.0157
SRP219564 HELQ 113510 RNAseq -0.4419 0.0512
TCGA HELQ 113510 RNAseq -0.1338 0.0313

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by HELQ expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HELQ:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HELQ 113510 2 11 17
GSE20123 HELQ 113510 2 11 17
GSE43470 HELQ 113510 0 13 30
GSE46452 HELQ 113510 1 36 22
GSE47630 HELQ 113510 0 20 20
GSE54993 HELQ 113510 8 0 62
GSE54994 HELQ 113510 1 9 43
GSE60625 HELQ 113510 0 0 11
GSE74703 HELQ 113510 0 11 25
GSE74704 HELQ 113510 1 6 13
TCGA HELQ 113510 11 34 51

Total number of gains: 26; Total number of losses: 151; Total Number of normals: 311.  


 

Somatic mutations of HELQ:

 

Generating mutation plots.

 

Highly correlated genes for HELQ:

 

Showing top 20/524 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HELQMNS10.763078303
HELQNANS0.760158303
HELQCOX180.722691303
HELQTMEM30B0.691151303
HELQLSS0.689561403
HELQRETSAT0.688778303
HELQFBXO100.687139303
HELQMUC200.68574303
HELQFRMD4B0.681548403
HELQPEX30.674246303
HELQRNF2070.673612303
HELQELAC10.670258404
HELQPIK3CB0.669198404
HELQPITHD10.669079504
HELQSTARD100.668647303
HELQUSP240.668284303
HELQSYPL10.666577403
HELQPRKAR2A0.666207403
HELQPINK10.664798303
HELQN4BP2L10.662099404

For details and further investigation, click here