| Full name: homocysteine inducible ER protein with ubiquitin like domain 1 | Alias Symbol: KIAA0025|Mif1|HERP|SUP | ||
| Type: protein-coding gene | Cytoband: 16q13 | ||
| Entrez ID: 9709 | HGNC ID: HGNC:13744 | Ensembl Gene: ENSG00000051108 | OMIM ID: 608070 |
| Drug and gene relationship at DGIdb | |||
Expression of HERPUD1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HERPUD1 | 9709 | 217168_s_at | -0.5244 | 0.4319 | |
| GSE20347 | HERPUD1 | 9709 | 217168_s_at | 0.1608 | 0.1427 | |
| GSE23400 | HERPUD1 | 9709 | 217168_s_at | 0.0200 | 0.8203 | |
| GSE26886 | HERPUD1 | 9709 | 217168_s_at | -0.8957 | 0.0000 | |
| GSE29001 | HERPUD1 | 9709 | 217168_s_at | -0.2423 | 0.3256 | |
| GSE38129 | HERPUD1 | 9709 | 217168_s_at | 0.1615 | 0.2140 | |
| GSE45670 | HERPUD1 | 9709 | 217168_s_at | -0.0987 | 0.7227 | |
| GSE53622 | HERPUD1 | 9709 | 47896 | -0.0256 | 0.8079 | |
| GSE53624 | HERPUD1 | 9709 | 47896 | -0.2157 | 0.0012 | |
| GSE63941 | HERPUD1 | 9709 | 217168_s_at | -0.1633 | 0.7957 | |
| GSE77861 | HERPUD1 | 9709 | 217168_s_at | -0.0293 | 0.9391 | |
| GSE97050 | HERPUD1 | 9709 | A_23_P54846 | 0.2726 | 0.4678 | |
| SRP007169 | HERPUD1 | 9709 | RNAseq | -0.4369 | 0.2947 | |
| SRP008496 | HERPUD1 | 9709 | RNAseq | -0.4414 | 0.0592 | |
| SRP064894 | HERPUD1 | 9709 | RNAseq | -0.1112 | 0.6226 | |
| SRP133303 | HERPUD1 | 9709 | RNAseq | 0.0575 | 0.7699 | |
| SRP159526 | HERPUD1 | 9709 | RNAseq | 0.1114 | 0.8256 | |
| SRP193095 | HERPUD1 | 9709 | RNAseq | -0.3674 | 0.0994 | |
| SRP219564 | HERPUD1 | 9709 | RNAseq | 0.7484 | 0.0785 | |
| TCGA | HERPUD1 | 9709 | RNAseq | -0.3601 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by HERPUD1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of HERPUD1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HERPUD1 | 9709 | 6 | 0 | 24 | |
| GSE20123 | HERPUD1 | 9709 | 6 | 1 | 23 | |
| GSE43470 | HERPUD1 | 9709 | 3 | 6 | 34 | |
| GSE46452 | HERPUD1 | 9709 | 38 | 1 | 20 | |
| GSE47630 | HERPUD1 | 9709 | 10 | 8 | 22 | |
| GSE54993 | HERPUD1 | 9709 | 2 | 4 | 64 | |
| GSE54994 | HERPUD1 | 9709 | 7 | 10 | 36 | |
| GSE60625 | HERPUD1 | 9709 | 4 | 0 | 7 | |
| GSE74703 | HERPUD1 | 9709 | 3 | 3 | 30 | |
| GSE74704 | HERPUD1 | 9709 | 5 | 0 | 15 | |
| TCGA | HERPUD1 | 9709 | 25 | 13 | 58 |
Total number of gains: 109; Total number of losses: 46; Total Number of normals: 333.
Somatic mutations of HERPUD1:
Generating mutation plots.
Highly correlated genes for HERPUD1:
Showing top 20/356 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HERPUD1 | PPP2CB | 0.81002 | 3 | 0 | 3 |
| HERPUD1 | PSMD8 | 0.786122 | 3 | 0 | 3 |
| HERPUD1 | PLAA | 0.774429 | 3 | 0 | 3 |
| HERPUD1 | UGP2 | 0.771709 | 3 | 0 | 3 |
| HERPUD1 | FYTTD1 | 0.769173 | 3 | 0 | 3 |
| HERPUD1 | COPS4 | 0.7688 | 3 | 0 | 3 |
| HERPUD1 | RBM3 | 0.767457 | 3 | 0 | 3 |
| HERPUD1 | GBGT1 | 0.763985 | 3 | 0 | 3 |
| HERPUD1 | NUDT21 | 0.762973 | 3 | 0 | 3 |
| HERPUD1 | ATP6V1B2 | 0.762325 | 3 | 0 | 3 |
| HERPUD1 | AP3B1 | 0.749721 | 3 | 0 | 3 |
| HERPUD1 | CMPK1 | 0.743204 | 3 | 0 | 3 |
| HERPUD1 | LMAN2 | 0.742407 | 3 | 0 | 3 |
| HERPUD1 | LRRK2 | 0.739764 | 3 | 0 | 3 |
| HERPUD1 | GOLGA4 | 0.738724 | 3 | 0 | 3 |
| HERPUD1 | SUCLG2 | 0.733976 | 3 | 0 | 3 |
| HERPUD1 | MMADHC | 0.728193 | 3 | 0 | 3 |
| HERPUD1 | ERGIC3 | 0.727859 | 3 | 0 | 3 |
| HERPUD1 | GPIHBP1 | 0.726804 | 3 | 0 | 3 |
| HERPUD1 | FNBP1 | 0.723712 | 4 | 0 | 4 |
For details and further investigation, click here
