| Full name: histocompatibility minor 13 | Alias Symbol: H13|dJ324O17.1|SPP|PSL3|IMP1|IMPAS|PSENL3|SPPL1 | ||
| Type: protein-coding gene | Cytoband: 20q11.21 | ||
| Entrez ID: 81502 | HGNC ID: HGNC:16435 | Ensembl Gene: ENSG00000101294 | OMIM ID: 607106 |
| Drug and gene relationship at DGIdb | |||
Expression of HM13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HM13 | 81502 | 224615_x_at | 0.3162 | 0.5509 | |
| GSE26886 | HM13 | 81502 | 224615_x_at | -0.6977 | 0.0021 | |
| GSE45670 | HM13 | 81502 | 224615_x_at | 0.1965 | 0.2218 | |
| GSE53622 | HM13 | 81502 | 50534 | -0.2352 | 0.0108 | |
| GSE53624 | HM13 | 81502 | 50534 | -0.1796 | 0.0007 | |
| GSE63941 | HM13 | 81502 | 224615_x_at | 0.8153 | 0.0366 | |
| GSE77861 | HM13 | 81502 | 224615_x_at | -0.0550 | 0.7563 | |
| GSE97050 | HM13 | 81502 | A_33_P3323453 | 0.6996 | 0.2253 | |
| SRP007169 | HM13 | 81502 | RNAseq | -1.8750 | 0.0000 | |
| SRP008496 | HM13 | 81502 | RNAseq | -1.6432 | 0.0000 | |
| SRP064894 | HM13 | 81502 | RNAseq | -0.1569 | 0.5199 | |
| SRP133303 | HM13 | 81502 | RNAseq | -0.0473 | 0.7503 | |
| SRP159526 | HM13 | 81502 | RNAseq | -0.5092 | 0.0174 | |
| SRP193095 | HM13 | 81502 | RNAseq | -0.3335 | 0.0070 | |
| SRP219564 | HM13 | 81502 | RNAseq | 0.0368 | 0.9232 | |
| TCGA | HM13 | 81502 | RNAseq | 0.0440 | 0.3499 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by HM13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of HM13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HM13 | 81502 | 14 | 0 | 16 | |
| GSE20123 | HM13 | 81502 | 14 | 0 | 16 | |
| GSE43470 | HM13 | 81502 | 11 | 0 | 32 | |
| GSE46452 | HM13 | 81502 | 29 | 0 | 30 | |
| GSE47630 | HM13 | 81502 | 24 | 0 | 16 | |
| GSE54993 | HM13 | 81502 | 0 | 17 | 53 | |
| GSE54994 | HM13 | 81502 | 27 | 1 | 25 | |
| GSE60625 | HM13 | 81502 | 0 | 0 | 11 | |
| GSE74703 | HM13 | 81502 | 10 | 0 | 26 | |
| GSE74704 | HM13 | 81502 | 9 | 0 | 11 | |
| TCGA | HM13 | 81502 | 49 | 1 | 46 |
Total number of gains: 187; Total number of losses: 19; Total Number of normals: 282.
Somatic mutations of HM13:
Generating mutation plots.
Highly correlated genes for HM13:
Showing top 20/627 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HM13 | FAM83B | 0.768619 | 3 | 0 | 3 |
| HM13 | OSTC | 0.756258 | 3 | 0 | 3 |
| HM13 | MCCC2 | 0.725161 | 4 | 0 | 3 |
| HM13 | NCLN | 0.720582 | 3 | 0 | 3 |
| HM13 | PDCD6 | 0.718333 | 3 | 0 | 3 |
| HM13 | APRT | 0.712489 | 4 | 0 | 3 |
| HM13 | PTBP3 | 0.708796 | 4 | 0 | 3 |
| HM13 | PPP4C | 0.699966 | 8 | 0 | 8 |
| HM13 | SLC25A39 | 0.699495 | 8 | 0 | 7 |
| HM13 | GFOD2 | 0.698646 | 3 | 0 | 3 |
| HM13 | PLK1 | 0.691872 | 3 | 0 | 3 |
| HM13 | FRMD8 | 0.689309 | 3 | 0 | 3 |
| HM13 | ATP1A1 | 0.688666 | 3 | 0 | 3 |
| HM13 | BLOC1S2 | 0.686936 | 3 | 0 | 3 |
| HM13 | HLA-E | 0.685879 | 3 | 0 | 3 |
| HM13 | EIF6 | 0.684952 | 7 | 0 | 7 |
| HM13 | JUP | 0.683801 | 8 | 0 | 7 |
| HM13 | GALNT14 | 0.682887 | 4 | 0 | 4 |
| HM13 | NHSL1 | 0.682461 | 3 | 0 | 3 |
| HM13 | RAB38 | 0.682209 | 4 | 0 | 4 |
For details and further investigation, click here
