| Full name: solute carrier family 25 member 39 | Alias Symbol: FLJ22407|CGI-69 | ||
| Type: protein-coding gene | Cytoband: 17q21.31 | ||
| Entrez ID: 51629 | HGNC ID: HGNC:24279 | Ensembl Gene: ENSG00000013306 | OMIM ID: 610820 |
| Drug and gene relationship at DGIdb | |||
Expression of SLC25A39:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLC25A39 | 51629 | 223649_s_at | 0.5583 | 0.2743 | |
| GSE26886 | SLC25A39 | 51629 | 223649_s_at | -1.0012 | 0.0007 | |
| GSE45670 | SLC25A39 | 51629 | 223649_s_at | 0.2175 | 0.2192 | |
| GSE53622 | SLC25A39 | 51629 | 7412 | 0.0141 | 0.9081 | |
| GSE53624 | SLC25A39 | 51629 | 7412 | 0.0754 | 0.1680 | |
| GSE63941 | SLC25A39 | 51629 | 223649_s_at | 2.1792 | 0.0000 | |
| GSE77861 | SLC25A39 | 51629 | 223649_s_at | -0.0706 | 0.7954 | |
| GSE97050 | SLC25A39 | 51629 | A_23_P100764 | 0.3905 | 0.6043 | |
| SRP007169 | SLC25A39 | 51629 | RNAseq | -1.6689 | 0.0000 | |
| SRP008496 | SLC25A39 | 51629 | RNAseq | -1.4250 | 0.0000 | |
| SRP064894 | SLC25A39 | 51629 | RNAseq | 0.0818 | 0.7666 | |
| SRP133303 | SLC25A39 | 51629 | RNAseq | -0.1556 | 0.3673 | |
| SRP159526 | SLC25A39 | 51629 | RNAseq | 0.0580 | 0.7689 | |
| SRP193095 | SLC25A39 | 51629 | RNAseq | -0.3010 | 0.0453 | |
| SRP219564 | SLC25A39 | 51629 | RNAseq | 0.1501 | 0.7167 | |
| TCGA | SLC25A39 | 51629 | RNAseq | 0.1302 | 0.0101 |
Upregulated datasets: 1; Downregulated datasets: 3.
Survival by SLC25A39 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SLC25A39:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLC25A39 | 51629 | 5 | 2 | 23 | |
| GSE20123 | SLC25A39 | 51629 | 5 | 2 | 23 | |
| GSE43470 | SLC25A39 | 51629 | 1 | 2 | 40 | |
| GSE46452 | SLC25A39 | 51629 | 32 | 0 | 27 | |
| GSE47630 | SLC25A39 | 51629 | 9 | 0 | 31 | |
| GSE54993 | SLC25A39 | 51629 | 3 | 4 | 63 | |
| GSE54994 | SLC25A39 | 51629 | 8 | 5 | 40 | |
| GSE60625 | SLC25A39 | 51629 | 4 | 0 | 7 | |
| GSE74703 | SLC25A39 | 51629 | 1 | 1 | 34 | |
| GSE74704 | SLC25A39 | 51629 | 3 | 1 | 16 | |
| TCGA | SLC25A39 | 51629 | 23 | 7 | 66 |
Total number of gains: 94; Total number of losses: 24; Total Number of normals: 370.
Somatic mutations of SLC25A39:
Generating mutation plots.
Highly correlated genes for SLC25A39:
Showing top 20/765 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLC25A39 | PPP1R13L | 0.794911 | 3 | 0 | 3 |
| SLC25A39 | UMPS | 0.780132 | 3 | 0 | 3 |
| SLC25A39 | PPP1CA | 0.780018 | 7 | 0 | 7 |
| SLC25A39 | FANCD2 | 0.765221 | 4 | 0 | 4 |
| SLC25A39 | PDCD6 | 0.757494 | 3 | 0 | 3 |
| SLC25A39 | C19orf33 | 0.751903 | 3 | 0 | 3 |
| SLC25A39 | STON2 | 0.750768 | 3 | 0 | 3 |
| SLC25A39 | MRPL3 | 0.745795 | 3 | 0 | 3 |
| SLC25A39 | ARHGEF19 | 0.744741 | 3 | 0 | 3 |
| SLC25A39 | PTBP3 | 0.737652 | 4 | 0 | 4 |
| SLC25A39 | FAM83B | 0.737415 | 4 | 0 | 4 |
| SLC25A39 | LSR | 0.734917 | 5 | 0 | 4 |
| SLC25A39 | RABGGTA | 0.733577 | 4 | 0 | 4 |
| SLC25A39 | LMAN2 | 0.732661 | 4 | 0 | 4 |
| SLC25A39 | AP1G2 | 0.732259 | 4 | 0 | 3 |
| SLC25A39 | PPP4C | 0.731613 | 8 | 0 | 8 |
| SLC25A39 | NHSL1 | 0.730579 | 3 | 0 | 3 |
| SLC25A39 | C1orf56 | 0.728803 | 3 | 0 | 3 |
| SLC25A39 | PREB | 0.727453 | 3 | 0 | 3 |
| SLC25A39 | TTLL4 | 0.726901 | 4 | 0 | 4 |
For details and further investigation, click here
