| Full name: sorting nexin 19 | Alias Symbol: KIAA0254|CHET8 | ||
| Type: protein-coding gene | Cytoband: 11q24.3-q25 | ||
| Entrez ID: 399979 | HGNC ID: HGNC:21532 | Ensembl Gene: ENSG00000120451 | OMIM ID: |
Expression of SNX19:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNX19 | 399979 | 202358_s_at | -0.0862 | 0.8088 | |
| GSE20347 | SNX19 | 399979 | 202358_s_at | -0.1812 | 0.1707 | |
| GSE23400 | SNX19 | 399979 | 202358_s_at | -0.1542 | 0.0004 | |
| GSE26886 | SNX19 | 399979 | 202358_s_at | 0.0970 | 0.5799 | |
| GSE29001 | SNX19 | 399979 | 202358_s_at | -0.3599 | 0.0499 | |
| GSE38129 | SNX19 | 399979 | 202358_s_at | -0.2963 | 0.0011 | |
| GSE45670 | SNX19 | 399979 | 202359_s_at | 0.1977 | 0.1850 | |
| GSE53622 | SNX19 | 399979 | 88788 | -0.1630 | 0.0095 | |
| GSE53624 | SNX19 | 399979 | 88788 | -0.2336 | 0.0031 | |
| GSE63941 | SNX19 | 399979 | 202358_s_at | -1.0062 | 0.0157 | |
| GSE77861 | SNX19 | 399979 | 202358_s_at | 0.0524 | 0.7068 | |
| GSE97050 | SNX19 | 399979 | A_23_P98345 | -0.1353 | 0.5463 | |
| SRP007169 | SNX19 | 399979 | RNAseq | -0.2609 | 0.4324 | |
| SRP008496 | SNX19 | 399979 | RNAseq | 0.0303 | 0.9255 | |
| SRP064894 | SNX19 | 399979 | RNAseq | -0.0871 | 0.5525 | |
| SRP133303 | SNX19 | 399979 | RNAseq | -0.2258 | 0.1395 | |
| SRP159526 | SNX19 | 399979 | RNAseq | -0.4131 | 0.1054 | |
| SRP193095 | SNX19 | 399979 | RNAseq | -0.2835 | 0.0005 | |
| SRP219564 | SNX19 | 399979 | RNAseq | -0.2349 | 0.5777 | |
| TCGA | SNX19 | 399979 | RNAseq | -0.2181 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by SNX19 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SNX19:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNX19 | 399979 | 0 | 13 | 17 | |
| GSE20123 | SNX19 | 399979 | 0 | 13 | 17 | |
| GSE43470 | SNX19 | 399979 | 2 | 7 | 34 | |
| GSE46452 | SNX19 | 399979 | 3 | 26 | 30 | |
| GSE47630 | SNX19 | 399979 | 2 | 19 | 19 | |
| GSE54993 | SNX19 | 399979 | 10 | 0 | 60 | |
| GSE54994 | SNX19 | 399979 | 5 | 19 | 29 | |
| GSE60625 | SNX19 | 399979 | 0 | 3 | 8 | |
| GSE74703 | SNX19 | 399979 | 1 | 5 | 30 | |
| GSE74704 | SNX19 | 399979 | 0 | 9 | 11 | |
| TCGA | SNX19 | 399979 | 6 | 49 | 41 |
Total number of gains: 29; Total number of losses: 163; Total Number of normals: 296.
Somatic mutations of SNX19:
Generating mutation plots.
Highly correlated genes for SNX19:
Showing top 20/264 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNX19 | LOXL4 | 0.818887 | 3 | 0 | 3 |
| SNX19 | FIBIN | 0.740149 | 3 | 0 | 3 |
| SNX19 | ERLEC1 | 0.738652 | 4 | 0 | 4 |
| SNX19 | HMG20A | 0.737167 | 3 | 0 | 3 |
| SNX19 | MXRA7 | 0.73236 | 3 | 0 | 3 |
| SNX19 | GYPC | 0.731726 | 3 | 0 | 3 |
| SNX19 | ZNF175 | 0.727411 | 4 | 0 | 4 |
| SNX19 | PEX19 | 0.727395 | 4 | 0 | 4 |
| SNX19 | STOML1 | 0.725833 | 3 | 0 | 3 |
| SNX19 | C20orf194 | 0.722985 | 3 | 0 | 3 |
| SNX19 | CASC4 | 0.720845 | 4 | 0 | 3 |
| SNX19 | C11orf54 | 0.714965 | 3 | 0 | 3 |
| SNX19 | AFF3 | 0.704783 | 4 | 0 | 4 |
| SNX19 | UBR3 | 0.703688 | 3 | 0 | 3 |
| SNX19 | DHX30 | 0.701762 | 3 | 0 | 3 |
| SNX19 | LGALSL | 0.698284 | 3 | 0 | 3 |
| SNX19 | WDR61 | 0.694013 | 3 | 0 | 3 |
| SNX19 | EPC2 | 0.693758 | 3 | 0 | 3 |
| SNX19 | SLFN12 | 0.693647 | 3 | 0 | 3 |
| SNX19 | BTG2 | 0.68267 | 3 | 0 | 3 |
For details and further investigation, click here
