HNRNPDL

 

Full name: heterogeneous nuclear ribonucleoprotein D like Alias Symbol: JKTBP|laAUF1
Type: protein-coding gene Cytoband: 4q21.22
Entrez ID: 9987 HGNC ID: HGNC:5037 Ensembl Gene: ENSG00000152795 OMIM ID: 607137
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of HNRNPDL:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HNRNPDL 9987 201993_x_at 0.0076 0.9839
GSE20347 HNRNPDL 9987 212454_x_at -0.0223 0.8997
GSE23400 HNRNPDL 9987 212454_x_at 0.1882 0.0080
GSE26886 HNRNPDL 9987 201993_x_at 0.6358 0.0013
GSE29001 HNRNPDL 9987 201993_x_at 0.1996 0.3158
GSE38129 HNRNPDL 9987 212454_x_at -0.0719 0.7268
GSE45670 HNRNPDL 9987 212454_x_at -0.3406 0.0009
GSE53622 HNRNPDL 9987 104032 -0.0392 0.5032
GSE53624 HNRNPDL 9987 104032 0.2252 0.0000
GSE63941 HNRNPDL 9987 209067_s_at -0.3835 0.3883
GSE77861 HNRNPDL 9987 212454_x_at -0.1583 0.5982
SRP007169 HNRNPDL 9987 RNAseq 0.3826 0.3073
SRP008496 HNRNPDL 9987 RNAseq 0.5608 0.0210
SRP064894 HNRNPDL 9987 RNAseq -0.2186 0.1597
SRP133303 HNRNPDL 9987 RNAseq -0.0029 0.9828
SRP159526 HNRNPDL 9987 RNAseq -0.1855 0.3360
SRP193095 HNRNPDL 9987 RNAseq -0.1062 0.2019
SRP219564 HNRNPDL 9987 RNAseq -0.2047 0.2964

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by HNRNPDL expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of HNRNPDL:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HNRNPDL 9987 2 11 17
GSE20123 HNRNPDL 9987 2 11 17
GSE43470 HNRNPDL 9987 0 13 30
GSE46452 HNRNPDL 9987 1 36 22
GSE47630 HNRNPDL 9987 0 20 20
GSE54993 HNRNPDL 9987 8 0 62
GSE54994 HNRNPDL 9987 1 9 43
GSE60625 HNRNPDL 9987 0 0 11
GSE74703 HNRNPDL 9987 0 11 25
GSE74704 HNRNPDL 9987 1 6 13
TCGA HNRNPDL 9987 12 34 50

Total number of gains: 27; Total number of losses: 151; Total Number of normals: 310.  


 

Somatic mutations of HNRNPDL:

 

Generating mutation plots.

 

Highly correlated genes for HNRNPDL:

 

Showing top 20/75 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HNRNPDLCCDC590.68697303
HNRNPDLNUP1600.654032303
HNRNPDLZZZ30.65268303
HNRNPDLGLT8D10.651774303
HNRNPDLC1orf520.643623303
HNRNPDLDICER10.64312303
HNRNPDLPTPRK0.615671403
HNRNPDLHADH0.607246303
HNRNPDLEXOSC80.604564504
HNRNPDLCOG20.601688303
HNRNPDLNUP540.601298504
HNRNPDLSIN3A0.599718303
HNRNPDLZNF3260.599603404
HNRNPDLDDX19A0.592827303
HNRNPDLNOL70.592569403
HNRNPDLPKNOX10.586755303
HNRNPDLPRPF40A0.586154504
HNRNPDLAVEN0.585577303
HNRNPDLING20.585176403
HNRNPDLHNRNPH30.582375705

For details and further investigation, click here