HNRNPL

 

Full name: heterogeneous nuclear ribonucleoprotein L Alias Symbol: 
Type: protein-coding gene Cytoband: 19q13.2
Entrez ID: 3191 HGNC ID: HGNC:5045 Ensembl Gene: ENSG00000104824 OMIM ID: 603083
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of HNRNPL:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HNRNPL 3191 35201_at 0.3849 0.5964
GSE20347 HNRNPL 3191 35201_at 0.1477 0.1441
GSE23400 HNRNPL 3191 35201_at 0.2025 0.0000
GSE26886 HNRNPL 3191 35201_at -0.1455 0.5179
GSE29001 HNRNPL 3191 35201_at -0.0024 0.9895
GSE38129 HNRNPL 3191 35201_at 0.2258 0.1776
GSE45670 HNRNPL 3191 35201_at 0.2924 0.0350
GSE63941 HNRNPL 3191 35201_at -0.4630 0.2316
GSE77861 HNRNPL 3191 35201_at 0.1689 0.3255
GSE97050 HNRNPL 3191 A_32_P109572 0.2401 0.2858
SRP007169 HNRNPL 3191 RNAseq 0.5701 0.0965
SRP008496 HNRNPL 3191 RNAseq 0.3318 0.1294
SRP064894 HNRNPL 3191 RNAseq 0.3554 0.0136
SRP133303 HNRNPL 3191 RNAseq 0.2739 0.0356
SRP159526 HNRNPL 3191 RNAseq 0.2949 0.1231
SRP193095 HNRNPL 3191 RNAseq 0.1341 0.0555
SRP219564 HNRNPL 3191 RNAseq 0.2726 0.1360
TCGA HNRNPL 3191 RNAseq 0.1487 0.0004

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by HNRNPL expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of HNRNPL:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HNRNPL 3191 7 4 19
GSE20123 HNRNPL 3191 7 3 20
GSE43470 HNRNPL 3191 4 10 29
GSE46452 HNRNPL 3191 47 2 10
GSE47630 HNRNPL 3191 9 5 26
GSE54993 HNRNPL 3191 17 3 50
GSE54994 HNRNPL 3191 6 9 38
GSE60625 HNRNPL 3191 9 0 2
GSE74703 HNRNPL 3191 4 6 26
GSE74704 HNRNPL 3191 7 1 12
TCGA HNRNPL 3191 15 15 66

Total number of gains: 132; Total number of losses: 58; Total Number of normals: 298.  


 

Somatic mutations of HNRNPL:

 

Generating mutation plots.

 

Highly correlated genes for HNRNPL:

 

Showing top 20/133 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HNRNPLARHGAP170.744899303
HNRNPLIGSF60.73423303
HNRNPLZNF6090.727284303
HNRNPLSP30.718598303
HNRNPLMGAT50.71589303
HNRNPLAP3D10.710825303
HNRNPLGATAD2A0.710533303
HNRNPLPNKP0.700325303
HNRNPLDGKQ0.696436303
HNRNPLPRR14L0.695251403
HNRNPLHERC40.69168303
HNRNPLARL13B0.690043303
HNRNPLCDK90.689318503
HNRNPLLDLR0.682796303
HNRNPLNLK0.673916403
HNRNPLYWHAH0.670326404
HNRNPLPHF5A0.669573403
HNRNPLNOSIP0.668089504
HNRNPLGMPR20.667433303
HNRNPLACIN10.654475503

For details and further investigation, click here