| Full name: HOXA transcript antisense RNA, myeloid-specific 1 | Alias Symbol: HOXA-AS1|NCRNA00179|HOXA1-AS1 | ||
| Type: non-coding RNA | Cytoband: 7p15.2 | ||
| Entrez ID: 100506311 | HGNC ID: HGNC:37117 | Ensembl Gene: ENSG00000233429 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of HOTAIRM1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HOTAIRM1 | 100506311 | 228642_at | -0.5858 | 0.1291 | |
| GSE26886 | HOTAIRM1 | 100506311 | 228642_at | -0.2406 | 0.5387 | |
| GSE45670 | HOTAIRM1 | 100506311 | 228642_at | -0.4420 | 0.0123 | |
| GSE53622 | HOTAIRM1 | 100506311 | 2624 | -0.8069 | 0.0000 | |
| GSE53624 | HOTAIRM1 | 100506311 | 99395 | -1.0925 | 0.0000 | |
| GSE63941 | HOTAIRM1 | 100506311 | 228642_at | -0.1121 | 0.9172 | |
| GSE77861 | HOTAIRM1 | 100506311 | 228642_at | -0.9091 | 0.0049 | |
| SRP007169 | HOTAIRM1 | 100506311 | RNAseq | -2.3405 | 0.0005 | |
| SRP064894 | HOTAIRM1 | 100506311 | RNAseq | -0.6093 | 0.0065 | |
| SRP133303 | HOTAIRM1 | 100506311 | RNAseq | -0.6317 | 0.0096 | |
| SRP159526 | HOTAIRM1 | 100506311 | RNAseq | -1.0226 | 0.0007 | |
| SRP193095 | HOTAIRM1 | 100506311 | RNAseq | -1.1088 | 0.0000 | |
| SRP219564 | HOTAIRM1 | 100506311 | RNAseq | -0.7749 | 0.0267 |
Upregulated datasets: 0; Downregulated datasets: 4.
Survival by HOTAIRM1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of HOTAIRM1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HOTAIRM1 | 100506311 | 16 | 1 | 13 | |
| GSE20123 | HOTAIRM1 | 100506311 | 16 | 1 | 13 | |
| GSE43470 | HOTAIRM1 | 100506311 | 4 | 0 | 39 | |
| GSE46452 | HOTAIRM1 | 100506311 | 10 | 2 | 47 | |
| GSE47630 | HOTAIRM1 | 100506311 | 8 | 1 | 31 | |
| GSE54993 | HOTAIRM1 | 100506311 | 0 | 6 | 64 | |
| GSE54994 | HOTAIRM1 | 100506311 | 21 | 2 | 30 | |
| GSE60625 | HOTAIRM1 | 100506311 | 0 | 0 | 11 | |
| GSE74703 | HOTAIRM1 | 100506311 | 4 | 0 | 32 | |
| GSE74704 | HOTAIRM1 | 100506311 | 10 | 1 | 9 | |
| TCGA | HOTAIRM1 | 100506311 | 54 | 7 | 35 |
Total number of gains: 143; Total number of losses: 21; Total Number of normals: 324.
Somatic mutations of HOTAIRM1:
Generating mutation plots.
Highly correlated genes for HOTAIRM1:
Showing top 20/469 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HOTAIRM1 | PEA15 | 0.7013 | 5 | 0 | 4 |
| HOTAIRM1 | APOBEC1 | 0.670572 | 3 | 0 | 3 |
| HOTAIRM1 | TMOD3 | 0.659779 | 4 | 0 | 4 |
| HOTAIRM1 | TRIP10 | 0.659036 | 5 | 0 | 5 |
| HOTAIRM1 | PCBP1-AS1 | 0.657712 | 3 | 0 | 3 |
| HOTAIRM1 | ABLIM3 | 0.656936 | 5 | 0 | 5 |
| HOTAIRM1 | TAX1BP1 | 0.655585 | 6 | 0 | 6 |
| HOTAIRM1 | SLC27A6 | 0.654092 | 5 | 0 | 5 |
| HOTAIRM1 | EHD3 | 0.653713 | 4 | 0 | 4 |
| HOTAIRM1 | CRTAC1 | 0.650158 | 5 | 0 | 5 |
| HOTAIRM1 | EDN3 | 0.649316 | 5 | 0 | 5 |
| HOTAIRM1 | CAB39L | 0.648481 | 5 | 0 | 5 |
| HOTAIRM1 | SNORA68 | 0.648424 | 3 | 0 | 3 |
| HOTAIRM1 | AIF1L | 0.647842 | 4 | 0 | 4 |
| HOTAIRM1 | TICAM1 | 0.647029 | 3 | 0 | 3 |
| HOTAIRM1 | PINK1 | 0.644676 | 4 | 0 | 4 |
| HOTAIRM1 | SECISBP2L | 0.641778 | 6 | 0 | 5 |
| HOTAIRM1 | HOXA-AS2 | 0.64091 | 6 | 0 | 6 |
| HOTAIRM1 | KAT2B | 0.640853 | 5 | 0 | 5 |
| HOTAIRM1 | MT1M | 0.640008 | 4 | 0 | 3 |
For details and further investigation, click here
