HOXB2

 

Full name: homeobox B2 Alias Symbol: 
Type: protein-coding gene Cytoband: 17q21.32
Entrez ID: 3212 HGNC ID: HGNC:5113 Ensembl Gene: ENSG00000173917 OMIM ID: 142967
Drug and gene relationship at DGIdb

 

Expression of HOXB2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HOXB2 3212 205453_at -0.5107 0.3983
GSE20347 HOXB2 3212 205453_at -0.2301 0.2859
GSE23400 HOXB2 3212 205453_at -0.1512 0.0912
GSE26886 HOXB2 3212 205453_at -1.0177 0.0012
GSE29001 HOXB2 3212 205453_at -0.1515 0.7481
GSE38129 HOXB2 3212 205453_at -0.1064 0.5465
GSE45670 HOXB2 3212 205453_at -0.5534 0.0804
GSE53622 HOXB2 3212 26107 0.2245 0.0297
GSE53624 HOXB2 3212 26107 0.4822 0.0000
GSE63941 HOXB2 3212 205453_at -1.8495 0.0612
GSE77861 HOXB2 3212 205453_at -0.2580 0.6337
GSE97050 HOXB2 3212 A_33_P3271273 -0.3601 0.1788
SRP007169 HOXB2 3212 RNAseq -1.2347 0.0112
SRP008496 HOXB2 3212 RNAseq -0.7514 0.0777
SRP064894 HOXB2 3212 RNAseq -0.0924 0.7684
SRP133303 HOXB2 3212 RNAseq -0.1633 0.5291
SRP159526 HOXB2 3212 RNAseq 0.3839 0.4486
SRP219564 HOXB2 3212 RNAseq -0.3479 0.4769
TCGA HOXB2 3212 RNAseq 0.2532 0.0868

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by HOXB2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HOXB2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HOXB2 3212 5 2 23
GSE20123 HOXB2 3212 5 2 23
GSE43470 HOXB2 3212 3 1 39
GSE46452 HOXB2 3212 32 0 27
GSE47630 HOXB2 3212 9 0 31
GSE54993 HOXB2 3212 2 4 64
GSE54994 HOXB2 3212 10 6 37
GSE60625 HOXB2 3212 4 0 7
GSE74703 HOXB2 3212 3 1 32
GSE74704 HOXB2 3212 4 1 15
TCGA HOXB2 3212 27 6 63

Total number of gains: 104; Total number of losses: 23; Total Number of normals: 361.  


 

Somatic mutations of HOXB2:

 

Generating mutation plots.

 

Highly correlated genes for HOXB2:

 

Showing top 20/238 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HOXB2PHYHIPL0.774715303
HOXB2AMOTL10.74751303
HOXB2PRICKLE20.72205303
HOXB2SLC44A20.721604303
HOXB2TXNDC110.718934303
HOXB2CYYR10.711972404
HOXB2NPFF0.702825303
HOXB2CLCC10.68456303
HOXB2ZNF3820.679561303
HOXB2TBRG10.675588303
HOXB2FBXO90.674435303
HOXB2HOXA40.67416504
HOXB2TRIM610.671416303
HOXB2ZNF8440.671177403
HOXB2HOXB30.6710951009
HOXB2CAPZA20.663085403
HOXB2CASP90.662536303
HOXB2CYP4V20.661033403
HOXB2EFEMP10.660089303
HOXB2PTGS20.657072303

For details and further investigation, click here