IFITM5

 

Full name: interferon induced transmembrane protein 5 Alias Symbol: fragilis4|Hrmp1|BRIL|DSPA1
Type: protein-coding gene Cytoband: 11p15.5
Entrez ID: 387733 HGNC ID: HGNC:16644 Ensembl Gene: ENSG00000206013 OMIM ID: 614757
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of IFITM5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 IFITM5 387733 43937 0.4140 0.0000
GSE53624 IFITM5 387733 43937 0.6374 0.0000
GSE97050 IFITM5 387733 A_33_P3352995 0.1454 0.4735
TCGA IFITM5 387733 RNAseq 1.6073 0.1928

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by IFITM5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of IFITM5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 IFITM5 387733 1 11 18
GSE20123 IFITM5 387733 1 12 17
GSE43470 IFITM5 387733 1 10 32
GSE46452 IFITM5 387733 7 8 44
GSE47630 IFITM5 387733 4 12 24
GSE54993 IFITM5 387733 3 2 65
GSE54994 IFITM5 387733 1 12 40
GSE60625 IFITM5 387733 0 0 11
GSE74703 IFITM5 387733 1 8 27
GSE74704 IFITM5 387733 0 8 12
TCGA IFITM5 387733 8 38 50

Total number of gains: 27; Total number of losses: 121; Total Number of normals: 340.  


 

Somatic mutations of IFITM5:

 

Generating mutation plots.

 

Highly correlated genes for IFITM5:

 

Showing top 20/117 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
IFITM5TRIM460.743901303
IFITM5MC1R0.736223303
IFITM5FAM181A0.733144303
IFITM5RHBDD30.72686303
IFITM5SLC26A10.719499303
IFITM5CHST100.718996303
IFITM5FFAR10.717069303
IFITM5DEFB1210.71406303
IFITM5CBX80.710762303
IFITM5LRFN40.709658303
IFITM5CPNE70.7092303
IFITM5SLC6A30.709031303
IFITM5PDZD70.707853303
IFITM5OR2T10.706017303
IFITM5PRDM130.705964303
IFITM5KCNK90.705061303
IFITM5LHB0.699952303
IFITM5FAM71F10.69826303
IFITM5E2F10.697053303
IFITM5ZDHHC190.696247303

For details and further investigation, click here