KLHDC3

 

Full name: kelch domain containing 3 Alias Symbol: PEAS|hPeas|dJ20C7.3
Type: protein-coding gene Cytoband: 6p21.1
Entrez ID: 116138 HGNC ID: HGNC:20704 Ensembl Gene: ENSG00000124702 OMIM ID: 611248
Drug and gene relationship at DGIdb

 

Expression of KLHDC3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KLHDC3 116138 214383_x_at 0.8904 0.0598
GSE20347 KLHDC3 116138 208784_s_at 0.1271 0.3355
GSE23400 KLHDC3 116138 214383_x_at 0.1076 0.0585
GSE26886 KLHDC3 116138 208784_s_at -0.3674 0.1869
GSE29001 KLHDC3 116138 208784_s_at 0.1723 0.5335
GSE38129 KLHDC3 116138 214383_x_at 0.1458 0.2497
GSE45670 KLHDC3 116138 208784_s_at 0.0446 0.6558
GSE53622 KLHDC3 116138 8583 0.0960 0.1470
GSE53624 KLHDC3 116138 8583 0.4375 0.0000
GSE63941 KLHDC3 116138 214383_x_at 1.9360 0.0003
GSE77861 KLHDC3 116138 208784_s_at -0.0904 0.5111
GSE97050 KLHDC3 116138 A_24_P343255 -0.2722 0.2333
SRP007169 KLHDC3 116138 RNAseq -1.0069 0.0052
SRP008496 KLHDC3 116138 RNAseq -0.9606 0.0000
SRP064894 KLHDC3 116138 RNAseq 0.5741 0.0524
SRP133303 KLHDC3 116138 RNAseq 0.1075 0.4991
SRP159526 KLHDC3 116138 RNAseq 0.2634 0.1308
SRP193095 KLHDC3 116138 RNAseq 0.0123 0.9138
SRP219564 KLHDC3 116138 RNAseq 0.3307 0.4144
TCGA KLHDC3 116138 RNAseq -0.0189 0.7142

Upregulated datasets: 1; Downregulated datasets: 1.  


 

Survival by KLHDC3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KLHDC3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KLHDC3 116138 7 0 23
GSE20123 KLHDC3 116138 7 0 23
GSE43470 KLHDC3 116138 6 0 37
GSE46452 KLHDC3 116138 2 9 48
GSE47630 KLHDC3 116138 8 4 28
GSE54993 KLHDC3 116138 3 2 65
GSE54994 KLHDC3 116138 11 4 38
GSE60625 KLHDC3 116138 0 1 10
GSE74703 KLHDC3 116138 6 0 30
GSE74704 KLHDC3 116138 3 0 17
TCGA KLHDC3 116138 21 13 62

Total number of gains: 74; Total number of losses: 33; Total Number of normals: 381.  


 

Somatic mutations of KLHDC3:

 

Generating mutation plots.

 

Highly correlated genes for KLHDC3:

 

Showing top 20/497 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KLHDC3PPP5C0.8913303
KLHDC3MPV17L0.851517303
KLHDC3TMEM2220.818155303
KLHDC3FLYWCH20.815601303
KLHDC3TNK10.812478303
KLHDC3DEDD0.786014303
KLHDC3PTPN60.768274303
KLHDC3CCDC1240.766528303
KLHDC3MGMT0.765079303
KLHDC3SND10.762475303
KLHDC3WDR50.761966303
KLHDC3SF3A10.758623303
KLHDC3KDM4A0.757364404
KLHDC3CDC370.756184303
KLHDC3POLDIP20.749438303
KLHDC3MAST10.746387303
KLHDC3JAG20.743285303
KLHDC3B4GALT20.74142303
KLHDC3UPF10.739204403
KLHDC3INO80E0.738455303

For details and further investigation, click here