KPTN

 

Full name: kaptin, actin binding protein Alias Symbol: 2E4
Type: protein-coding gene Cytoband: 19q13.32
Entrez ID: 11133 HGNC ID: HGNC:6404 Ensembl Gene: ENSG00000118162 OMIM ID: 615620
Drug and gene relationship at DGIdb

 

Expression of KPTN:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KPTN 11133 220160_s_at 0.4967 0.1030
GSE20347 KPTN 11133 220160_s_at 0.1770 0.1301
GSE23400 KPTN 11133 220160_s_at 0.1121 0.0248
GSE26886 KPTN 11133 220160_s_at 0.5990 0.0055
GSE29001 KPTN 11133 220160_s_at 0.2604 0.3336
GSE38129 KPTN 11133 220160_s_at 0.3472 0.0009
GSE45670 KPTN 11133 220160_s_at 0.4639 0.0014
GSE53622 KPTN 11133 5970 0.3661 0.0047
GSE53624 KPTN 11133 5970 0.6981 0.0000
GSE63941 KPTN 11133 220160_s_at 0.6196 0.1864
GSE77861 KPTN 11133 220160_s_at 0.0947 0.6998
GSE97050 KPTN 11133 A_23_P67391 -0.0584 0.9270
SRP007169 KPTN 11133 RNAseq -0.0323 0.9479
SRP064894 KPTN 11133 RNAseq 1.1181 0.0001
SRP133303 KPTN 11133 RNAseq 0.4585 0.0578
SRP159526 KPTN 11133 RNAseq 0.9874 0.0085
SRP193095 KPTN 11133 RNAseq 0.2365 0.0591
SRP219564 KPTN 11133 RNAseq 0.7189 0.0199
TCGA KPTN 11133 RNAseq 0.4535 0.0000

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by KPTN expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KPTN:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KPTN 11133 4 4 22
GSE20123 KPTN 11133 4 3 23
GSE43470 KPTN 11133 3 10 30
GSE46452 KPTN 11133 45 1 13
GSE47630 KPTN 11133 8 7 25
GSE54993 KPTN 11133 17 4 49
GSE54994 KPTN 11133 4 14 35
GSE60625 KPTN 11133 9 0 2
GSE74703 KPTN 11133 3 7 26
GSE74704 KPTN 11133 4 1 15
TCGA KPTN 11133 14 18 64

Total number of gains: 115; Total number of losses: 69; Total Number of normals: 304.  


 

Somatic mutations of KPTN:

 

Generating mutation plots.

 

Highly correlated genes for KPTN:

 

Showing top 20/345 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KPTNFASTKD30.738489303
KPTNRAC30.737247303
KPTNNAPSA0.721961303
KPTNUCN20.69228303
KPTNZNF6280.680299403
KPTNFMNL20.658722303
KPTNTANGO20.656545303
KPTNMYH100.654355303
KPTNPPARD0.653788404
KPTNINO80B0.651316303
KPTNFCHSD10.647869303
KPTNRUVBL20.6459881009
KPTNZNF5810.634841303
KPTNFANCE0.631771504
KPTNASPHD10.630344403
KPTNRTTN0.62419404
KPTNINTS10.622968805
KPTNDBN10.622689303
KPTNICE10.621848504
KPTNOBSCN0.617606504

For details and further investigation, click here