NMNAT2

 

Full name: nicotinamide nucleotide adenylyltransferase 2 Alias Symbol: KIAA0479|PNAT2
Type: protein-coding gene Cytoband: 1q25.3
Entrez ID: 23057 HGNC ID: HGNC:16789 Ensembl Gene: ENSG00000157064 OMIM ID: 608701
Drug and gene relationship at DGIdb

 

Expression of NMNAT2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NMNAT2 23057 209755_at 0.0336 0.9537
GSE20347 NMNAT2 23057 209755_at -0.0535 0.5426
GSE23400 NMNAT2 23057 209755_at -0.2285 0.0000
GSE26886 NMNAT2 23057 209755_at -0.1144 0.4307
GSE29001 NMNAT2 23057 209755_at -0.1096 0.3967
GSE38129 NMNAT2 23057 209755_at -0.2976 0.0204
GSE45670 NMNAT2 23057 1552712_a_at 0.2101 0.1332
GSE53622 NMNAT2 23057 9428 -0.1479 0.2131
GSE53624 NMNAT2 23057 9428 -0.0456 0.7595
GSE63941 NMNAT2 23057 1552712_a_at 0.1798 0.7668
GSE77861 NMNAT2 23057 1552712_a_at 0.0337 0.7787
GSE97050 NMNAT2 23057 A_23_P354908 -0.0792 0.7798
SRP064894 NMNAT2 23057 RNAseq 0.6958 0.0153
SRP133303 NMNAT2 23057 RNAseq 0.9797 0.0179
SRP159526 NMNAT2 23057 RNAseq 0.2969 0.6189
SRP193095 NMNAT2 23057 RNAseq 1.9640 0.0000
SRP219564 NMNAT2 23057 RNAseq 0.8901 0.2300
TCGA NMNAT2 23057 RNAseq -0.1468 0.5033

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by NMNAT2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NMNAT2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NMNAT2 23057 12 0 18
GSE20123 NMNAT2 23057 12 0 18
GSE43470 NMNAT2 23057 7 1 35
GSE46452 NMNAT2 23057 3 1 55
GSE47630 NMNAT2 23057 14 0 26
GSE54993 NMNAT2 23057 0 6 64
GSE54994 NMNAT2 23057 15 0 38
GSE60625 NMNAT2 23057 0 0 11
GSE74703 NMNAT2 23057 7 1 28
GSE74704 NMNAT2 23057 5 0 15
TCGA NMNAT2 23057 40 3 53

Total number of gains: 115; Total number of losses: 12; Total Number of normals: 361.  


 

Somatic mutations of NMNAT2:

 

Generating mutation plots.

 

Highly correlated genes for NMNAT2:

 

Showing top 20/623 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NMNAT2PCGF20.778926303
NMNAT2CCDC144A0.769855303
NMNAT2INO80D0.749508404
NMNAT2CER10.748754303
NMNAT2P2RX60.737546303
NMNAT2OR10J10.73623303
NMNAT2SYDE10.734755404
NMNAT2KRT380.727817303
NMNAT2C1orf680.726451303
NMNAT2NPY1R0.726078303
NMNAT2GABRR20.723759404
NMNAT2TM4SF180.712469403
NMNAT2CETN10.710363303
NMNAT2MRPL410.709028404
NMNAT2NLGN4X0.707233303
NMNAT2GNAT20.707138504
NMNAT2IFNA160.705674303
NMNAT2NES0.705435403
NMNAT2GDF100.704674303
NMNAT2MCAM0.704416303

For details and further investigation, click here