| Full name: long intergenic non-protein coding RNA 523 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 14q32.2 | ||
| Entrez ID: 283601 | HGNC ID: HGNC:20117 | Ensembl Gene: ENSG00000196273 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00523:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00523 | 283601 | 1560198_at | -0.1048 | 0.6365 | |
| GSE26886 | LINC00523 | 283601 | 1560198_at | -0.1459 | 0.2089 | |
| GSE45670 | LINC00523 | 283601 | 1560198_at | 0.1060 | 0.1983 | |
| GSE53622 | LINC00523 | 283601 | 29149 | 0.0912 | 0.2387 | |
| GSE53624 | LINC00523 | 283601 | 29149 | 0.0631 | 0.2791 | |
| GSE63941 | LINC00523 | 283601 | 1560198_at | 0.2130 | 0.1211 | |
| GSE77861 | LINC00523 | 283601 | 1560198_at | -0.0346 | 0.7735 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00523 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00523:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00523 | 283601 | 9 | 5 | 16 | |
| GSE20123 | LINC00523 | 283601 | 9 | 4 | 17 | |
| GSE43470 | LINC00523 | 283601 | 7 | 4 | 32 | |
| GSE46452 | LINC00523 | 283601 | 18 | 3 | 38 | |
| GSE47630 | LINC00523 | 283601 | 11 | 8 | 21 | |
| GSE54993 | LINC00523 | 283601 | 3 | 8 | 59 | |
| GSE54994 | LINC00523 | 283601 | 21 | 4 | 28 | |
| GSE60625 | LINC00523 | 283601 | 0 | 2 | 9 | |
| GSE74703 | LINC00523 | 283601 | 6 | 3 | 27 | |
| GSE74704 | LINC00523 | 283601 | 5 | 3 | 12 | |
| TCGA | LINC00523 | 283601 | 32 | 17 | 47 |
Total number of gains: 121; Total number of losses: 61; Total Number of normals: 306.
Somatic mutations of LINC00523:
Generating mutation plots.
Highly correlated genes for LINC00523:
Showing top 20/240 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00523 | HGFAC | 0.756189 | 3 | 0 | 3 |
| LINC00523 | NUTM1 | 0.719795 | 5 | 0 | 4 |
| LINC00523 | IFNL2 | 0.719448 | 3 | 0 | 3 |
| LINC00523 | PDYN | 0.716201 | 3 | 0 | 3 |
| LINC00523 | SPRED3 | 0.692192 | 3 | 0 | 3 |
| LINC00523 | KCNH3 | 0.688945 | 5 | 0 | 4 |
| LINC00523 | TSPAN11 | 0.686722 | 3 | 0 | 3 |
| LINC00523 | SLC22A8 | 0.67189 | 6 | 0 | 5 |
| LINC00523 | FAM71F1 | 0.66188 | 4 | 0 | 3 |
| LINC00523 | KRTAP4-8 | 0.660624 | 5 | 0 | 4 |
| LINC00523 | SRCIN1 | 0.659073 | 4 | 0 | 4 |
| LINC00523 | RAPGEF3 | 0.656958 | 3 | 0 | 3 |
| LINC00523 | FAM205A | 0.6555 | 4 | 0 | 4 |
| LINC00523 | TMEM105 | 0.653331 | 5 | 0 | 4 |
| LINC00523 | FFAR1 | 0.652793 | 4 | 0 | 3 |
| LINC00523 | KRT73 | 0.651747 | 4 | 0 | 4 |
| LINC00523 | ROM1 | 0.651048 | 3 | 0 | 3 |
| LINC00523 | RASGRP4 | 0.647399 | 3 | 0 | 3 |
| LINC00523 | LINC00486 | 0.645202 | 3 | 0 | 3 |
| LINC00523 | CCDC154 | 0.643982 | 4 | 0 | 4 |
For details and further investigation, click here
