| Full name: long intergenic non-protein coding RNA 674 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 17q24.2 | ||
| Entrez ID: 100499466 | HGNC ID: HGNC:44355 | Ensembl Gene: ENSG00000237854 | OMIM ID: |
Expression of LINC00674:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00674 | 100499466 | 227567_at | 0.1469 | 0.8072 | |
| GSE26886 | LINC00674 | 100499466 | 227567_at | 1.6388 | 0.0000 | |
| GSE45670 | LINC00674 | 100499466 | 227567_at | -0.2385 | 0.4187 | |
| GSE63941 | LINC00674 | 100499466 | 227567_at | -0.4009 | 0.4853 | |
| GSE77861 | LINC00674 | 100499466 | 227567_at | 0.9615 | 0.0032 | |
| SRP007169 | LINC00674 | 100499466 | RNAseq | 0.9901 | 0.0349 | |
| SRP008496 | LINC00674 | 100499466 | RNAseq | 0.8637 | 0.0025 | |
| SRP064894 | LINC00674 | 100499466 | RNAseq | 0.2208 | 0.1275 | |
| SRP133303 | LINC00674 | 100499466 | RNAseq | 0.1242 | 0.4179 | |
| SRP159526 | LINC00674 | 100499466 | RNAseq | 0.3208 | 0.1664 | |
| SRP193095 | LINC00674 | 100499466 | RNAseq | 0.1715 | 0.0432 | |
| SRP219564 | LINC00674 | 100499466 | RNAseq | -0.0084 | 0.9766 |
Upregulated datasets: 1; Downregulated datasets: 0.
Copy number change of LINC00674:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00674 | 100499466 | 3 | 2 | 25 | |
| GSE20123 | LINC00674 | 100499466 | 3 | 2 | 25 | |
| GSE43470 | LINC00674 | 100499466 | 4 | 0 | 39 | |
| GSE46452 | LINC00674 | 100499466 | 31 | 1 | 27 | |
| GSE47630 | LINC00674 | 100499466 | 7 | 1 | 32 | |
| GSE54993 | LINC00674 | 100499466 | 2 | 5 | 63 | |
| GSE54994 | LINC00674 | 100499466 | 9 | 4 | 40 | |
| GSE60625 | LINC00674 | 100499466 | 4 | 2 | 5 | |
| GSE74703 | LINC00674 | 100499466 | 4 | 0 | 32 | |
| GSE74704 | LINC00674 | 100499466 | 3 | 1 | 16 | |
| TCGA | LINC00674 | 100499466 | 28 | 8 | 60 |
Total number of gains: 98; Total number of losses: 26; Total Number of normals: 364.
Somatic mutations of LINC00674:
Generating mutation plots.
Highly correlated genes for LINC00674:
Showing top 20/193 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00674 | BMPR1A | 0.768826 | 3 | 0 | 3 |
| LINC00674 | PLEKHA3 | 0.764338 | 4 | 0 | 3 |
| LINC00674 | CLIC4 | 0.762443 | 3 | 0 | 3 |
| LINC00674 | MACF1 | 0.761037 | 3 | 0 | 3 |
| LINC00674 | STK3 | 0.759354 | 3 | 0 | 3 |
| LINC00674 | ZNF827 | 0.754303 | 3 | 0 | 3 |
| LINC00674 | FSTL1 | 0.75312 | 3 | 0 | 3 |
| LINC00674 | INSR | 0.74008 | 3 | 0 | 3 |
| LINC00674 | SPOCK1 | 0.73635 | 3 | 0 | 3 |
| LINC00674 | SMURF2 | 0.73056 | 4 | 0 | 3 |
| LINC00674 | ANKRD10 | 0.728027 | 4 | 0 | 4 |
| LINC00674 | KANSL1-AS1 | 0.726528 | 3 | 0 | 3 |
| LINC00674 | DUSP12 | 0.72591 | 3 | 0 | 3 |
| LINC00674 | FNDC3B | 0.720926 | 3 | 0 | 3 |
| LINC00674 | ENAH | 0.718123 | 3 | 0 | 3 |
| LINC00674 | SEC62 | 0.7118 | 4 | 0 | 3 |
| LINC00674 | COL4A2 | 0.71055 | 3 | 0 | 3 |
| LINC00674 | RFTN1 | 0.705949 | 3 | 0 | 3 |
| LINC00674 | EIF2AK2 | 0.705123 | 3 | 0 | 3 |
| LINC00674 | SYT1 | 0.704774 | 3 | 0 | 3 |
For details and further investigation, click here
