| Full name: long intergenic non-protein coding RNA 1096 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 4p15.33 | ||
| Entrez ID: 285548 | HGNC ID: HGNC:27739 | Ensembl Gene: ENSG00000246095 | OMIM ID: |
Expression of LINC01096:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01096 | 285548 | 236112_at | 0.3372 | 0.1838 | |
| GSE26886 | LINC01096 | 285548 | 236112_at | 0.6086 | 0.0429 | |
| GSE45670 | LINC01096 | 285548 | 236112_at | 0.1929 | 0.0684 | |
| GSE53622 | LINC01096 | 285548 | 18644 | 0.9169 | 0.0000 | |
| GSE53624 | LINC01096 | 285548 | 124262 | 1.3832 | 0.0000 | |
| GSE63941 | LINC01096 | 285548 | 236112_at | 0.3000 | 0.3959 | |
| GSE77861 | LINC01096 | 285548 | 236112_at | -0.0309 | 0.7353 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by LINC01096 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01096:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01096 | 285548 | 0 | 18 | 12 | |
| GSE20123 | LINC01096 | 285548 | 0 | 18 | 12 | |
| GSE43470 | LINC01096 | 285548 | 1 | 15 | 27 | |
| GSE46452 | LINC01096 | 285548 | 1 | 36 | 22 | |
| GSE47630 | LINC01096 | 285548 | 0 | 20 | 20 | |
| GSE54993 | LINC01096 | 285548 | 10 | 0 | 60 | |
| GSE54994 | LINC01096 | 285548 | 4 | 12 | 37 | |
| GSE60625 | LINC01096 | 285548 | 0 | 0 | 11 | |
| GSE74703 | LINC01096 | 285548 | 1 | 13 | 22 | |
| GSE74704 | LINC01096 | 285548 | 0 | 11 | 9 |
Total number of gains: 17; Total number of losses: 143; Total Number of normals: 232.
Somatic mutations of LINC01096:
Generating mutation plots.
Highly correlated genes for LINC01096:
Showing top 20/78 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01096 | NR2E1 | 0.798157 | 3 | 0 | 3 |
| LINC01096 | NKX2-2 | 0.739534 | 4 | 0 | 4 |
| LINC01096 | PRR18 | 0.699469 | 3 | 0 | 3 |
| LINC01096 | NRIP3 | 0.64946 | 3 | 0 | 3 |
| LINC01096 | ZBTB42 | 0.626071 | 3 | 0 | 3 |
| LINC01096 | ZNF385A | 0.611097 | 3 | 0 | 3 |
| LINC01096 | FAM161A | 0.610021 | 4 | 0 | 3 |
| LINC01096 | CEP57L1 | 0.6063 | 3 | 0 | 3 |
| LINC01096 | MSI1 | 0.606192 | 3 | 0 | 3 |
| LINC01096 | DPM3 | 0.603195 | 3 | 0 | 3 |
| LINC01096 | PRDM13 | 0.601395 | 5 | 0 | 3 |
| LINC01096 | PATZ1 | 0.59961 | 3 | 0 | 3 |
| LINC01096 | ADAMTS3 | 0.598159 | 3 | 0 | 3 |
| LINC01096 | POLRMT | 0.595947 | 3 | 0 | 3 |
| LINC01096 | ZNF518B | 0.595424 | 4 | 0 | 4 |
| LINC01096 | SLC27A1 | 0.592044 | 3 | 0 | 3 |
| LINC01096 | SLC25A22 | 0.591977 | 3 | 0 | 3 |
| LINC01096 | SUV39H1 | 0.589246 | 4 | 0 | 3 |
| LINC01096 | TBC1D10B | 0.583857 | 3 | 0 | 3 |
| LINC01096 | DENND1A | 0.583714 | 3 | 0 | 3 |
For details and further investigation, click here
