| Full name: long intergenic non-protein coding RNA 1133 | Alias Symbol: lncRNA-PAGBC | ||
| Type: non-coding RNA | Cytoband: 1q23.2 | ||
| Entrez ID: 100505633 | HGNC ID: HGNC:49447 | Ensembl Gene: ENSG00000224259 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC01133:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01133 | 100505633 | 239370_at | 0.0001 | 0.9999 | |
| GSE26886 | LINC01133 | 100505633 | 239370_at | -0.9808 | 0.0038 | |
| GSE45670 | LINC01133 | 100505633 | 239370_at | 0.6606 | 0.2350 | |
| GSE53622 | LINC01133 | 100505633 | 83523 | -0.1632 | 0.3112 | |
| GSE53624 | LINC01133 | 100505633 | 83523 | -0.1200 | 0.3540 | |
| GSE63941 | LINC01133 | 100505633 | 239370_at | -0.4135 | 0.8273 | |
| GSE77861 | LINC01133 | 100505633 | 239370_at | 1.0574 | 0.1990 | |
| SRP007169 | LINC01133 | 100505633 | RNAseq | 0.8204 | 0.2106 | |
| SRP064894 | LINC01133 | 100505633 | RNAseq | 0.1460 | 0.7929 | |
| SRP133303 | LINC01133 | 100505633 | RNAseq | 0.5175 | 0.1677 | |
| SRP159526 | LINC01133 | 100505633 | RNAseq | 0.8647 | 0.2856 | |
| SRP193095 | LINC01133 | 100505633 | RNAseq | -0.6042 | 0.0639 | |
| SRP219564 | LINC01133 | 100505633 | RNAseq | -0.1287 | 0.8295 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC01133 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01133:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01133 | 100505633 | 10 | 0 | 20 | |
| GSE20123 | LINC01133 | 100505633 | 10 | 0 | 20 | |
| GSE43470 | LINC01133 | 100505633 | 7 | 2 | 34 | |
| GSE46452 | LINC01133 | 100505633 | 2 | 1 | 56 | |
| GSE47630 | LINC01133 | 100505633 | 14 | 0 | 26 | |
| GSE54993 | LINC01133 | 100505633 | 0 | 5 | 65 | |
| GSE54994 | LINC01133 | 100505633 | 16 | 0 | 37 | |
| GSE60625 | LINC01133 | 100505633 | 0 | 0 | 11 | |
| GSE74703 | LINC01133 | 100505633 | 7 | 2 | 27 | |
| GSE74704 | LINC01133 | 100505633 | 4 | 0 | 16 |
Total number of gains: 70; Total number of losses: 10; Total Number of normals: 312.
Somatic mutations of LINC01133:
Generating mutation plots.
Highly correlated genes for LINC01133:
Showing top 20/26 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01133 | DCUN1D1 | 0.691324 | 3 | 0 | 3 |
| LINC01133 | MAGEF1 | 0.680001 | 3 | 0 | 3 |
| LINC01133 | CYB561D1 | 0.652886 | 3 | 0 | 3 |
| LINC01133 | FAM118B | 0.645637 | 3 | 0 | 3 |
| LINC01133 | B4GALT4 | 0.611605 | 5 | 0 | 3 |
| LINC01133 | TP63 | 0.609675 | 3 | 0 | 3 |
| LINC01133 | LRRC4 | 0.606976 | 4 | 0 | 3 |
| LINC01133 | ZNF219 | 0.606864 | 3 | 0 | 3 |
| LINC01133 | TYSND1 | 0.601736 | 3 | 0 | 3 |
| LINC01133 | AADACL2 | 0.597003 | 4 | 0 | 3 |
| LINC01133 | SESN3 | 0.595254 | 3 | 0 | 3 |
| LINC01133 | NTS | 0.587353 | 4 | 0 | 3 |
| LINC01133 | PRKCI | 0.573677 | 3 | 0 | 3 |
| LINC01133 | P2RY1 | 0.569024 | 5 | 0 | 4 |
| LINC01133 | CALCB | 0.56425 | 3 | 0 | 3 |
| LINC01133 | TMEM41B | 0.560629 | 4 | 0 | 3 |
| LINC01133 | COBLL1 | 0.556082 | 4 | 0 | 3 |
| LINC01133 | ACAP2 | 0.55383 | 4 | 0 | 3 |
| LINC01133 | KCTD1 | 0.549911 | 4 | 0 | 3 |
| LINC01133 | GPD2 | 0.542247 | 6 | 0 | 4 |
For details and further investigation, click here
