LONRF1

 

Full name: LON peptidase N-terminal domain and ring finger 1 Alias Symbol: FLJ23749|RNF191
Type: protein-coding gene Cytoband: 8p23.1
Entrez ID: 91694 HGNC ID: HGNC:26302 Ensembl Gene: ENSG00000154359 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LONRF1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LONRF1 91694 226038_at -0.6366 0.3093
GSE20347 LONRF1 91694 215322_at -0.4329 0.1214
GSE23400 LONRF1 91694 215322_at -0.6597 0.0000
GSE26886 LONRF1 91694 226038_at -0.6332 0.0401
GSE29001 LONRF1 91694 215322_at -0.6632 0.0071
GSE38129 LONRF1 91694 215322_at -0.7182 0.0036
GSE45670 LONRF1 91694 226038_at -1.1694 0.0000
GSE53622 LONRF1 91694 116401 -0.4884 0.0001
GSE53624 LONRF1 91694 116401 -0.6577 0.0000
GSE63941 LONRF1 91694 226038_at -0.4142 0.6747
GSE77861 LONRF1 91694 226038_at 0.2745 0.4069
GSE97050 LONRF1 91694 A_23_P94216 -0.9429 0.0835
SRP007169 LONRF1 91694 RNAseq -0.1060 0.7809
SRP008496 LONRF1 91694 RNAseq 0.1888 0.5063
SRP064894 LONRF1 91694 RNAseq -1.3191 0.0001
SRP133303 LONRF1 91694 RNAseq -0.8698 0.0003
SRP159526 LONRF1 91694 RNAseq 0.2205 0.6931
SRP193095 LONRF1 91694 RNAseq -0.5948 0.0012
SRP219564 LONRF1 91694 RNAseq -0.8551 0.1336
TCGA LONRF1 91694 RNAseq -0.2397 0.0145

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by LONRF1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of LONRF1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LONRF1 91694 4 10 16
GSE20123 LONRF1 91694 4 11 15
GSE43470 LONRF1 91694 4 9 30
GSE46452 LONRF1 91694 12 14 33
GSE47630 LONRF1 91694 10 7 23
GSE54993 LONRF1 91694 3 14 53
GSE54994 LONRF1 91694 8 18 27
GSE60625 LONRF1 91694 3 0 8
GSE74703 LONRF1 91694 4 7 25
GSE74704 LONRF1 91694 3 7 10
TCGA LONRF1 91694 13 41 42

Total number of gains: 68; Total number of losses: 138; Total Number of normals: 282.  


 

Somatic mutations of LONRF1:

 

Generating mutation plots.

 

Highly correlated genes for LONRF1:

 

Showing top 20/475 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LONRF1OCRL0.864616303
LONRF1WDR730.766062303
LONRF1AZIN10.759655303
LONRF1GLYR10.74546303
LONRF1TMEM2180.713892303
LONRF1TMEM1810.704861303
LONRF1HOXA40.701178403
LONRF1FAM118B0.694578303
LONRF1CFL20.691613403
LONRF1NHS0.689435303
LONRF1HYLS10.687218303
LONRF1ITGA10.681695303
LONRF1TLE20.679413505
LONRF1KPNA30.675938403
LONRF1GFRA10.674035403
LONRF1ADAMTS9-AS20.671466404
LONRF1KLHL230.66656504
LONRF1CAPZA20.666102303
LONRF1CDC37L10.661651403
LONRF1CRNKL10.661169303

For details and further investigation, click here