| Full name: LYR motif containing 1 | Alias Symbol: A211C6.1 | ||
| Type: protein-coding gene | Cytoband: 16p12.3 | ||
| Entrez ID: 57149 | HGNC ID: HGNC:25074 | Ensembl Gene: ENSG00000102897 | OMIM ID: 614709 |
| Drug and gene relationship at DGIdb | |||
Expression of LYRM1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LYRM1 | 57149 | 203897_at | -0.2358 | 0.7297 | |
| GSE20347 | LYRM1 | 57149 | 203897_at | -0.3946 | 0.0455 | |
| GSE23400 | LYRM1 | 57149 | 203897_at | -0.3110 | 0.0007 | |
| GSE26886 | LYRM1 | 57149 | 203897_at | -0.5639 | 0.0039 | |
| GSE29001 | LYRM1 | 57149 | 203897_at | -0.4743 | 0.1107 | |
| GSE38129 | LYRM1 | 57149 | 203897_at | -0.4989 | 0.0030 | |
| GSE45670 | LYRM1 | 57149 | 203897_at | -0.5055 | 0.0006 | |
| GSE53622 | LYRM1 | 57149 | 13423 | -0.5009 | 0.0000 | |
| GSE53624 | LYRM1 | 57149 | 13423 | -0.5750 | 0.0000 | |
| GSE63941 | LYRM1 | 57149 | 203897_at | -0.4049 | 0.4959 | |
| GSE77861 | LYRM1 | 57149 | 203897_at | -0.2192 | 0.3026 | |
| GSE97050 | LYRM1 | 57149 | A_23_P54929 | -0.3163 | 0.2657 | |
| SRP007169 | LYRM1 | 57149 | RNAseq | -1.1196 | 0.0046 | |
| SRP008496 | LYRM1 | 57149 | RNAseq | -0.9546 | 0.0005 | |
| SRP064894 | LYRM1 | 57149 | RNAseq | -0.8096 | 0.0003 | |
| SRP133303 | LYRM1 | 57149 | RNAseq | -0.2660 | 0.1644 | |
| SRP159526 | LYRM1 | 57149 | RNAseq | -0.2319 | 0.3593 | |
| SRP193095 | LYRM1 | 57149 | RNAseq | -0.4047 | 0.0003 | |
| SRP219564 | LYRM1 | 57149 | RNAseq | -0.9310 | 0.0524 | |
| TCGA | LYRM1 | 57149 | RNAseq | -0.2230 | 0.0018 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by LYRM1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of LYRM1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LYRM1 | 57149 | 6 | 3 | 21 | |
| GSE20123 | LYRM1 | 57149 | 6 | 2 | 22 | |
| GSE43470 | LYRM1 | 57149 | 3 | 3 | 37 | |
| GSE46452 | LYRM1 | 57149 | 38 | 1 | 20 | |
| GSE47630 | LYRM1 | 57149 | 11 | 6 | 23 | |
| GSE54993 | LYRM1 | 57149 | 3 | 5 | 62 | |
| GSE54994 | LYRM1 | 57149 | 3 | 10 | 40 | |
| GSE60625 | LYRM1 | 57149 | 4 | 0 | 7 | |
| GSE74703 | LYRM1 | 57149 | 3 | 2 | 31 | |
| GSE74704 | LYRM1 | 57149 | 3 | 1 | 16 | |
| TCGA | LYRM1 | 57149 | 19 | 14 | 63 |
Total number of gains: 99; Total number of losses: 47; Total Number of normals: 342.
Somatic mutations of LYRM1:
Generating mutation plots.
Highly correlated genes for LYRM1:
Showing top 20/719 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LYRM1 | CBLL1 | 0.792239 | 3 | 0 | 3 |
| LYRM1 | RSAD1 | 0.791957 | 3 | 0 | 3 |
| LYRM1 | FAM122C | 0.785036 | 3 | 0 | 3 |
| LYRM1 | ZNF649 | 0.778005 | 3 | 0 | 3 |
| LYRM1 | ICA1L | 0.761982 | 3 | 0 | 3 |
| LYRM1 | CASP3 | 0.760899 | 3 | 0 | 3 |
| LYRM1 | CASP9 | 0.757809 | 3 | 0 | 3 |
| LYRM1 | ANAPC16 | 0.756416 | 3 | 0 | 3 |
| LYRM1 | C6orf89 | 0.754392 | 3 | 0 | 3 |
| LYRM1 | ZNF256 | 0.735918 | 3 | 0 | 3 |
| LYRM1 | POLR2L | 0.732634 | 3 | 0 | 3 |
| LYRM1 | AP3M1 | 0.730502 | 3 | 0 | 3 |
| LYRM1 | GOLPH3 | 0.729037 | 3 | 0 | 3 |
| LYRM1 | VAMP3 | 0.725106 | 4 | 0 | 4 |
| LYRM1 | STK40 | 0.718735 | 4 | 0 | 4 |
| LYRM1 | PPM1L | 0.713765 | 5 | 0 | 5 |
| LYRM1 | MIF4GD | 0.71186 | 3 | 0 | 3 |
| LYRM1 | FOXO3 | 0.706168 | 3 | 0 | 3 |
| LYRM1 | ABHD14B | 0.703701 | 4 | 0 | 3 |
| LYRM1 | UBE2R2 | 0.699045 | 4 | 0 | 3 |
For details and further investigation, click here
