UBE2R2

 

Full name: ubiquitin conjugating enzyme E2 R2 Alias Symbol: UBC3B|CDC34B|FLJ20419|MGC10481
Type: protein-coding gene Cytoband: 9p13.3
Entrez ID: 54926 HGNC ID: HGNC:19907 Ensembl Gene: ENSG00000107341 OMIM ID: 612506
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of UBE2R2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 UBE2R2 54926 223014_at -0.3489 0.4167
GSE26886 UBE2R2 54926 223014_at -0.6742 0.0037
GSE45670 UBE2R2 54926 223014_at -0.2400 0.0867
GSE53622 UBE2R2 54926 52550 -0.4925 0.0000
GSE53624 UBE2R2 54926 52550 -0.3309 0.0000
GSE63941 UBE2R2 54926 223014_at -0.8493 0.0301
GSE77861 UBE2R2 54926 223014_at -0.2735 0.3816
GSE97050 UBE2R2 54926 A_33_P3333820 -0.5678 0.0778
SRP007169 UBE2R2 54926 RNAseq -1.5604 0.0006
SRP008496 UBE2R2 54926 RNAseq -1.1995 0.0000
SRP064894 UBE2R2 54926 RNAseq -0.2477 0.1205
SRP133303 UBE2R2 54926 RNAseq -0.3046 0.0256
SRP159526 UBE2R2 54926 RNAseq -0.4998 0.0151
SRP193095 UBE2R2 54926 RNAseq -0.8373 0.0000
SRP219564 UBE2R2 54926 RNAseq -0.2651 0.4681
TCGA UBE2R2 54926 RNAseq -0.0098 0.8563

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by UBE2R2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of UBE2R2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 UBE2R2 54926 3 15 12
GSE20123 UBE2R2 54926 3 15 12
GSE43470 UBE2R2 54926 3 10 30
GSE46452 UBE2R2 54926 6 15 38
GSE47630 UBE2R2 54926 1 20 19
GSE54993 UBE2R2 54926 6 0 64
GSE54994 UBE2R2 54926 6 12 35
GSE60625 UBE2R2 54926 0 0 11
GSE74703 UBE2R2 54926 2 7 27
GSE74704 UBE2R2 54926 0 12 8
TCGA UBE2R2 54926 16 45 35

Total number of gains: 46; Total number of losses: 151; Total Number of normals: 291.  


 

Somatic mutations of UBE2R2:

 

Generating mutation plots.

 

Highly correlated genes for UBE2R2:

 

Showing top 20/610 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
UBE2R2CCDC1590.778289303
UBE2R2ARHGAP310.777075303
UBE2R2TMX40.767723303
UBE2R2CYP4V20.758644303
UBE2R2ZNF6490.754114303
UBE2R2FGF70.750498303
UBE2R2AFF30.749806303
UBE2R2C70.744038303
UBE2R2CTSO0.743835303
UBE2R2GOLGA30.741401303
UBE2R2MACROD20.740189303
UBE2R2SARM10.729751303
UBE2R2RNF1250.727487303
UBE2R2TCF210.727282404
UBE2R2DCP1A0.712865303
UBE2R2STK190.712756505
UBE2R2FYCO10.712643303
UBE2R2SOCS20.711829303
UBE2R2UQCRFS10.706777404
UBE2R2MED70.704454303

For details and further investigation, click here