NDST1

 

Full name: N-deacetylase and N-sulfotransferase 1 Alias Symbol: NST1
Type: protein-coding gene Cytoband: 5q33.1
Entrez ID: 3340 HGNC ID: HGNC:7680 Ensembl Gene: ENSG00000070614 OMIM ID: 600853
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of NDST1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NDST1 3340 202607_at -0.0285 0.9751
GSE20347 NDST1 3340 202607_at -0.9435 0.0000
GSE23400 NDST1 3340 202607_at -0.6485 0.0000
GSE26886 NDST1 3340 1554010_at 0.1067 0.8063
GSE29001 NDST1 3340 202607_at -0.6992 0.0045
GSE38129 NDST1 3340 202607_at -0.7160 0.0000
GSE45670 NDST1 3340 202607_at -0.0595 0.7423
GSE53622 NDST1 3340 8235 -1.3330 0.0000
GSE53624 NDST1 3340 8235 -1.0690 0.0000
GSE63941 NDST1 3340 202607_at -0.7531 0.1221
GSE77861 NDST1 3340 202607_at -0.4177 0.1370
GSE97050 NDST1 3340 A_33_P3300092 -0.7486 0.0964
SRP007169 NDST1 3340 RNAseq -2.7493 0.0000
SRP008496 NDST1 3340 RNAseq -2.6777 0.0000
SRP064894 NDST1 3340 RNAseq -0.7158 0.0000
SRP133303 NDST1 3340 RNAseq -0.9429 0.0000
SRP159526 NDST1 3340 RNAseq -1.2850 0.0001
SRP193095 NDST1 3340 RNAseq -0.7953 0.0000
SRP219564 NDST1 3340 RNAseq -0.6848 0.0362
TCGA NDST1 3340 RNAseq -0.1201 0.0516

Upregulated datasets: 0; Downregulated datasets: 5.  


 

Survival by NDST1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NDST1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NDST1 3340 1 12 17
GSE20123 NDST1 3340 1 12 17
GSE43470 NDST1 3340 1 10 32
GSE46452 NDST1 3340 0 27 32
GSE47630 NDST1 3340 0 20 20
GSE54993 NDST1 3340 9 1 60
GSE54994 NDST1 3340 2 15 36
GSE60625 NDST1 3340 0 0 11
GSE74703 NDST1 3340 1 7 28
GSE74704 NDST1 3340 1 7 12
TCGA NDST1 3340 5 37 54

Total number of gains: 21; Total number of losses: 148; Total Number of normals: 319.  


 

Somatic mutations of NDST1:

 

Generating mutation plots.

 

Highly correlated genes for NDST1:

 

Showing top 20/1109 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NDST1MBLAC20.782072303
NDST1RMND5B0.766145909
NDST1DDI20.75505303
NDST1ABR0.748306909
NDST1TOM10.74694910010
NDST1NAPA0.74566909
NDST1ABLIM20.744707706
NDST1ANKRD310.742576404
NDST1CCDC120.741636404
NDST1SCNN1B0.734604808
NDST1ARHGEF10L0.7289081009
NDST1CASC30.724174303
NDST1SH3GLB10.722269807
NDST1CA130.719863303
NDST1EVPL0.718212808
NDST1KLHL20.714447707
NDST1MORN30.709966303
NDST1GRN0.709259808
NDST1TPCN10.7086281009
NDST1PDLIM20.706371806

For details and further investigation, click here