NSD1

 

Full name: nuclear receptor binding SET domain protein 1 Alias Symbol: ARA267|FLJ22263|KMT3B
Type: protein-coding gene Cytoband: 5q35.3
Entrez ID: 64324 HGNC ID: HGNC:14234 Ensembl Gene: ENSG00000165671 OMIM ID: 606681
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of NSD1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NSD1 64324 219084_at 0.4304 0.1723
GSE20347 NSD1 64324 219084_at -0.1078 0.3149
GSE23400 NSD1 64324 219084_at -0.1035 0.0213
GSE26886 NSD1 64324 219084_at 0.2157 0.1893
GSE29001 NSD1 64324 219084_at -0.0239 0.8922
GSE38129 NSD1 64324 219084_at -0.1117 0.1902
GSE45670 NSD1 64324 219084_at 0.2216 0.0531
GSE53622 NSD1 64324 82581 -0.2361 0.0005
GSE53624 NSD1 64324 82581 -0.1594 0.0010
GSE63941 NSD1 64324 219084_at 0.4799 0.2069
GSE77861 NSD1 64324 219084_at -0.0575 0.7478
GSE97050 NSD1 64324 A_23_P124327 -0.2481 0.2666
SRP007169 NSD1 64324 RNAseq 0.2519 0.6385
SRP008496 NSD1 64324 RNAseq 0.1020 0.7294
SRP064894 NSD1 64324 RNAseq -0.2710 0.1559
SRP133303 NSD1 64324 RNAseq -0.1541 0.1915
SRP159526 NSD1 64324 RNAseq -0.1256 0.7403
SRP193095 NSD1 64324 RNAseq -0.0462 0.6461
SRP219564 NSD1 64324 RNAseq -0.0878 0.7342
TCGA NSD1 64324 RNAseq 0.0239 0.5952

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by NSD1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NSD1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NSD1 64324 2 13 15
GSE20123 NSD1 64324 2 13 15
GSE43470 NSD1 64324 1 11 31
GSE46452 NSD1 64324 0 27 32
GSE47630 NSD1 64324 1 20 19
GSE54993 NSD1 64324 10 2 58
GSE54994 NSD1 64324 2 17 34
GSE60625 NSD1 64324 1 0 10
GSE74703 NSD1 64324 1 7 28
GSE74704 NSD1 64324 1 6 13
TCGA NSD1 64324 8 35 53

Total number of gains: 29; Total number of losses: 151; Total Number of normals: 308.  


 

Somatic mutations of NSD1:

 

Generating mutation plots.

 

Highly correlated genes for NSD1:

 

Showing top 20/279 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NSD1CASKIN20.847684303
NSD1CDC370.839675303
NSD1TBCD0.818847303
NSD1FLYWCH20.815674303
NSD1RBM15B0.794321303
NSD1UBIAD10.789638303
NSD1SF3B20.789622303
NSD1MEAF60.780509303
NSD1ZNF4080.778959303
NSD1CRTC20.772826303
NSD1BAZ1B0.771067303
NSD1RHBDD20.764261303
NSD1ZC3HC10.763597303
NSD1MEPCE0.762937303
NSD1EIF2B50.757671303
NSD1DDX230.757557303
NSD1TRMU0.756013303
NSD1STAU10.749112303
NSD1BOLA10.744352303
NSD1SLC29A30.74077303

For details and further investigation, click here