PFAS

 

Full name: phosphoribosylformylglycinamidine synthase Alias Symbol: PURL|FGARAT|KIAA0361|GATD8
Type: protein-coding gene Cytoband: 17p13.1
Entrez ID: 5198 HGNC ID: HGNC:8863 Ensembl Gene: ENSG00000178921 OMIM ID: 602133
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of PFAS:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PFAS 5198 213302_at 0.5163 0.2647
GSE20347 PFAS 5198 213302_at 0.6584 0.0041
GSE23400 PFAS 5198 213302_at 0.5467 0.0000
GSE26886 PFAS 5198 213302_at 1.3487 0.0000
GSE29001 PFAS 5198 213302_at 0.4830 0.0834
GSE38129 PFAS 5198 213302_at 0.6684 0.0000
GSE45670 PFAS 5198 213302_at 0.6367 0.0016
GSE53622 PFAS 5198 73080 0.7343 0.0000
GSE53624 PFAS 5198 73080 0.6769 0.0000
GSE63941 PFAS 5198 213302_at 1.1955 0.0108
GSE77861 PFAS 5198 213302_at 0.5362 0.0557
GSE97050 PFAS 5198 A_23_P402610 0.7604 0.1662
SRP007169 PFAS 5198 RNAseq 1.8817 0.0001
SRP008496 PFAS 5198 RNAseq 1.9733 0.0000
SRP064894 PFAS 5198 RNAseq 0.5330 0.0345
SRP133303 PFAS 5198 RNAseq 0.3498 0.0194
SRP159526 PFAS 5198 RNAseq 0.9467 0.0033
SRP193095 PFAS 5198 RNAseq 0.5572 0.0000
SRP219564 PFAS 5198 RNAseq 0.9088 0.0550
TCGA PFAS 5198 RNAseq 0.0904 0.1739

Upregulated datasets: 4; Downregulated datasets: 0.  


 

Survival by PFAS expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PFAS:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PFAS 5198 4 2 24
GSE20123 PFAS 5198 4 3 23
GSE43470 PFAS 5198 1 6 36
GSE46452 PFAS 5198 34 1 24
GSE47630 PFAS 5198 7 1 32
GSE54993 PFAS 5198 4 3 63
GSE54994 PFAS 5198 5 8 40
GSE60625 PFAS 5198 4 0 7
GSE74703 PFAS 5198 1 3 32
GSE74704 PFAS 5198 2 1 17
TCGA PFAS 5198 17 21 58

Total number of gains: 83; Total number of losses: 49; Total Number of normals: 356.  


 

Somatic mutations of PFAS:

 

Generating mutation plots.

 

Highly correlated genes for PFAS:

 

Showing top 20/1758 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PFASMDM20.797949303
PFASL3MBTL30.754797303
PFASPET1170.740784403
PFASXPO50.733836606
PFASZCCHC30.732679404
PFASUCK20.72932303
PFASMCM80.726256707
PFASZNF5120.725106303
PFASXPNPEP30.716286303
PFASFMNL20.71483505
PFASPPIL10.71287605
PFASZBTB90.70919605
PFASEME10.70869605
PFASMASTL0.70471505
PFASKIF140.70379211011
PFASCDCA20.703652605
PFASDBF40.7025251009
PFASRBL10.701018807
PFASNEDD10.700857606
PFASNUF20.698567807

For details and further investigation, click here