| Full name: PSMD6 antisense RNA 2 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 3p14.1 | ||
| Entrez ID: 100507062 | HGNC ID: HGNC:44125 | Ensembl Gene: ENSG00000239653 | OMIM ID: |
Expression of PSMD6-AS2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PSMD6-AS2 | 100507062 | 232527_at | -0.3523 | 0.5920 | |
| GSE26886 | PSMD6-AS2 | 100507062 | 232527_at | -1.5830 | 0.0000 | |
| GSE45670 | PSMD6-AS2 | 100507062 | 232527_at | -0.3732 | 0.0247 | |
| GSE53622 | PSMD6-AS2 | 100507062 | 31640 | -0.1670 | 0.0440 | |
| GSE53624 | PSMD6-AS2 | 100507062 | 31640 | -0.2345 | 0.0012 | |
| GSE63941 | PSMD6-AS2 | 100507062 | 232527_at | -0.2412 | 0.6449 | |
| GSE77861 | PSMD6-AS2 | 100507062 | 232527_at | -0.3110 | 0.1057 | |
| SRP064894 | PSMD6-AS2 | 100507062 | RNAseq | -0.1686 | 0.5281 | |
| SRP133303 | PSMD6-AS2 | 100507062 | RNAseq | -0.7738 | 0.0002 | |
| SRP159526 | PSMD6-AS2 | 100507062 | RNAseq | -1.4514 | 0.0092 | |
| SRP193095 | PSMD6-AS2 | 100507062 | RNAseq | -0.4522 | 0.0004 | |
| SRP219564 | PSMD6-AS2 | 100507062 | RNAseq | -0.8094 | 0.0843 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by PSMD6-AS2 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of PSMD6-AS2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PSMD6-AS2 | 100507062 | 0 | 18 | 12 | |
| GSE20123 | PSMD6-AS2 | 100507062 | 0 | 18 | 12 | |
| GSE43470 | PSMD6-AS2 | 100507062 | 0 | 19 | 24 | |
| GSE46452 | PSMD6-AS2 | 100507062 | 2 | 17 | 40 | |
| GSE47630 | PSMD6-AS2 | 100507062 | 1 | 24 | 15 | |
| GSE54993 | PSMD6-AS2 | 100507062 | 5 | 2 | 63 | |
| GSE54994 | PSMD6-AS2 | 100507062 | 1 | 33 | 19 | |
| GSE60625 | PSMD6-AS2 | 100507062 | 3 | 1 | 7 | |
| GSE74703 | PSMD6-AS2 | 100507062 | 0 | 15 | 21 | |
| GSE74704 | PSMD6-AS2 | 100507062 | 0 | 12 | 8 |
Total number of gains: 12; Total number of losses: 159; Total Number of normals: 221.
Somatic mutations of PSMD6-AS2:
Generating mutation plots.
Highly correlated genes for PSMD6-AS2:
Showing top 20/224 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PSMD6-AS2 | CD2AP | 0.748725 | 3 | 0 | 3 |
| PSMD6-AS2 | STXBP5 | 0.743072 | 4 | 0 | 4 |
| PSMD6-AS2 | RAP2C | 0.721197 | 3 | 0 | 3 |
| PSMD6-AS2 | ATXN7 | 0.710538 | 6 | 0 | 4 |
| PSMD6-AS2 | ENSA | 0.699873 | 3 | 0 | 3 |
| PSMD6-AS2 | ZNF493 | 0.699388 | 3 | 0 | 3 |
| PSMD6-AS2 | SPAG16 | 0.698337 | 3 | 0 | 3 |
| PSMD6-AS2 | ZHX1 | 0.687064 | 4 | 0 | 3 |
| PSMD6-AS2 | RPS25 | 0.685251 | 3 | 0 | 3 |
| PSMD6-AS2 | SRD5A1 | 0.684495 | 3 | 0 | 3 |
| PSMD6-AS2 | SMIM14 | 0.683329 | 4 | 0 | 3 |
| PSMD6-AS2 | GPD1L | 0.680576 | 3 | 0 | 3 |
| PSMD6-AS2 | JAK2 | 0.679062 | 3 | 0 | 3 |
| PSMD6-AS2 | ZNF823 | 0.678955 | 3 | 0 | 3 |
| PSMD6-AS2 | PIK3C2G | 0.678115 | 4 | 0 | 4 |
| PSMD6-AS2 | FAM221A | 0.675348 | 3 | 0 | 3 |
| PSMD6-AS2 | CXCL17 | 0.6673 | 3 | 0 | 3 |
| PSMD6-AS2 | CCDC6 | 0.666115 | 3 | 0 | 3 |
| PSMD6-AS2 | CYP2J2 | 0.661782 | 4 | 0 | 4 |
| PSMD6-AS2 | AK3 | 0.661415 | 3 | 0 | 3 |
For details and further investigation, click here
