| Full name: ribosome binding factor A | Alias Symbol: FLJ21172|HsT169 | ||
| Type: protein-coding gene | Cytoband: 18q23 | ||
| Entrez ID: 79863 | HGNC ID: HGNC:26120 | Ensembl Gene: ENSG00000101546 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RBFA:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RBFA | 79863 | 219419_at | -0.1100 | 0.7302 | |
| GSE20347 | RBFA | 79863 | 219419_at | -0.0772 | 0.5357 | |
| GSE23400 | RBFA | 79863 | 219419_at | -0.0119 | 0.8203 | |
| GSE26886 | RBFA | 79863 | 219419_at | -0.0537 | 0.7779 | |
| GSE29001 | RBFA | 79863 | 219419_at | -0.2168 | 0.3094 | |
| GSE38129 | RBFA | 79863 | 219419_at | -0.0959 | 0.3307 | |
| GSE45670 | RBFA | 79863 | 219419_at | -0.0995 | 0.4158 | |
| GSE53622 | RBFA | 79863 | 26550 | -0.2182 | 0.0167 | |
| GSE53624 | RBFA | 79863 | 26550 | -0.0945 | 0.1181 | |
| GSE63941 | RBFA | 79863 | 219419_at | -0.4904 | 0.3876 | |
| GSE77861 | RBFA | 79863 | 219419_at | 0.0385 | 0.8338 | |
| GSE97050 | RBFA | 79863 | A_23_P153086 | -0.1413 | 0.5305 | |
| SRP007169 | RBFA | 79863 | RNAseq | -0.7811 | 0.0482 | |
| SRP008496 | RBFA | 79863 | RNAseq | -0.7985 | 0.0264 | |
| SRP064894 | RBFA | 79863 | RNAseq | 0.2243 | 0.2626 | |
| SRP133303 | RBFA | 79863 | RNAseq | -0.2342 | 0.1150 | |
| SRP159526 | RBFA | 79863 | RNAseq | -0.3471 | 0.2134 | |
| SRP193095 | RBFA | 79863 | RNAseq | -0.0674 | 0.6032 | |
| SRP219564 | RBFA | 79863 | RNAseq | -0.3438 | 0.3715 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RBFA expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of RBFA:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RBFA | 79863 | 1 | 12 | 17 | |
| GSE20123 | RBFA | 79863 | 1 | 12 | 17 | |
| GSE43470 | RBFA | 79863 | 0 | 12 | 31 | |
| GSE46452 | RBFA | 79863 | 1 | 26 | 32 | |
| GSE47630 | RBFA | 79863 | 5 | 22 | 13 | |
| GSE54993 | RBFA | 79863 | 9 | 0 | 61 | |
| GSE54994 | RBFA | 79863 | 1 | 19 | 33 | |
| GSE60625 | RBFA | 79863 | 0 | 4 | 7 | |
| GSE74703 | RBFA | 79863 | 0 | 8 | 28 | |
| GSE74704 | RBFA | 79863 | 0 | 9 | 11 | |
| TCGA | RBFA | 79863 | 7 | 45 | 44 |
Total number of gains: 25; Total number of losses: 169; Total Number of normals: 294.
Somatic mutations of RBFA:
Generating mutation plots.
Highly correlated genes for RBFA:
Showing top 20/56 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RBFA | HCFC2 | 0.76072 | 3 | 0 | 3 |
| RBFA | LSM12 | 0.701007 | 3 | 0 | 3 |
| RBFA | WBP2 | 0.69295 | 3 | 0 | 3 |
| RBFA | BAG6 | 0.68091 | 3 | 0 | 3 |
| RBFA | GPCPD1 | 0.677434 | 3 | 0 | 3 |
| RBFA | STX10 | 0.676364 | 3 | 0 | 3 |
| RBFA | DDX6 | 0.67534 | 3 | 0 | 3 |
| RBFA | MAN1B1 | 0.673081 | 3 | 0 | 3 |
| RBFA | NDUFA7 | 0.670447 | 3 | 0 | 3 |
| RBFA | ERP29 | 0.665028 | 3 | 0 | 3 |
| RBFA | MBLAC1 | 0.66242 | 3 | 0 | 3 |
| RBFA | COASY | 0.658658 | 3 | 0 | 3 |
| RBFA | POLRMT | 0.655083 | 3 | 0 | 3 |
| RBFA | TMUB2 | 0.653241 | 4 | 0 | 3 |
| RBFA | NXF1 | 0.6443 | 4 | 0 | 3 |
| RBFA | SHMT1 | 0.641601 | 3 | 0 | 3 |
| RBFA | TSR2 | 0.633069 | 5 | 0 | 4 |
| RBFA | EZH1 | 0.630123 | 4 | 0 | 3 |
| RBFA | DNAJC8 | 0.625361 | 4 | 0 | 3 |
| RBFA | ACADVL | 0.62284 | 5 | 0 | 4 |
For details and further investigation, click here
