RNF135

 

Full name: ring finger protein 135 Alias Symbol: MGC13061
Type: protein-coding gene Cytoband: 17q11.2
Entrez ID: 84282 HGNC ID: HGNC:21158 Ensembl Gene: ENSG00000181481 OMIM ID: 611358
Drug and gene relationship at DGIdb

 

Expression of RNF135:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RNF135 84282 223592_s_at -0.4498 0.2651
GSE26886 RNF135 84282 223592_s_at 0.2373 0.4132
GSE45670 RNF135 84282 223592_s_at -0.5149 0.0027
GSE53622 RNF135 84282 4103 -0.5573 0.0000
GSE53624 RNF135 84282 4103 -0.5742 0.0000
GSE63941 RNF135 84282 223592_s_at -0.0588 0.9143
GSE77861 RNF135 84282 223592_s_at -0.4988 0.1915
GSE97050 RNF135 84282 A_23_P252283 -0.2463 0.3069
SRP007169 RNF135 84282 RNAseq -1.7719 0.0000
SRP008496 RNF135 84282 RNAseq -1.3606 0.0000
SRP064894 RNF135 84282 RNAseq -0.1455 0.3464
SRP133303 RNF135 84282 RNAseq -0.2879 0.0196
SRP159526 RNF135 84282 RNAseq -0.4840 0.0603
SRP193095 RNF135 84282 RNAseq -0.4415 0.0000
SRP219564 RNF135 84282 RNAseq -0.4182 0.1574
TCGA RNF135 84282 RNAseq 0.0628 0.3302

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by RNF135 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of RNF135:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RNF135 84282 8 2 20
GSE20123 RNF135 84282 9 2 19
GSE43470 RNF135 84282 0 1 42
GSE46452 RNF135 84282 33 1 25
GSE47630 RNF135 84282 7 1 32
GSE54993 RNF135 84282 2 3 65
GSE54994 RNF135 84282 7 6 40
GSE60625 RNF135 84282 4 0 7
GSE74703 RNF135 84282 0 1 35
GSE74704 RNF135 84282 6 2 12
TCGA RNF135 84282 19 10 67

Total number of gains: 95; Total number of losses: 29; Total Number of normals: 364.  


 

Somatic mutations of RNF135:

 

Generating mutation plots.

 

Highly correlated genes for RNF135:

 

Showing top 20/976 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RNF135PROSER10.800111303
RNF135C1orf560.795196303
RNF135N4BP2L20.79358303
RNF135GPBP10.776097303
RNF135SNX180.761217303
RNF135CDC160.752423303
RNF135DHX290.743238404
RNF135CCNYL10.738736404
RNF135CHCHD10.731667303
RNF135PDLIM20.730761303
RNF135MAU20.729801605
RNF135SETMAR0.729024303
RNF135CHP10.725686404
RNF135GOLGB10.725246303
RNF135ZRANB10.723165303
RNF135PPA10.722923303
RNF135TSPO0.721621505
RNF135EPB41L4A0.719658303
RNF135CAPNS10.718184606
RNF135PLEKHM10.715658504

For details and further investigation, click here