SDF2L1

 

Full name: stromal cell derived factor 2 like 1 Alias Symbol: AP000553.C22.4|OTTHUMT00000075032
Type: protein-coding gene Cytoband: 22q11.21
Entrez ID: 23753 HGNC ID: HGNC:10676 Ensembl Gene: ENSG00000128228 OMIM ID: 607551
Drug and gene relationship at DGIdb

 

Expression of SDF2L1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SDF2L1 23753 218681_s_at 0.6344 0.1692
GSE20347 SDF2L1 23753 218681_s_at 0.3005 0.1236
GSE23400 SDF2L1 23753 218681_s_at 0.2884 0.0000
GSE26886 SDF2L1 23753 218681_s_at 0.4667 0.0400
GSE29001 SDF2L1 23753 218681_s_at 0.3468 0.2730
GSE38129 SDF2L1 23753 218681_s_at 0.5890 0.0135
GSE45670 SDF2L1 23753 218681_s_at 0.7468 0.0021
GSE53622 SDF2L1 23753 21364 0.5362 0.0000
GSE53624 SDF2L1 23753 21364 0.6382 0.0000
GSE63941 SDF2L1 23753 218681_s_at 0.0687 0.9332
GSE77861 SDF2L1 23753 218681_s_at 0.4249 0.0604
GSE97050 SDF2L1 23753 A_23_P6344 0.5849 0.1697
SRP007169 SDF2L1 23753 RNAseq 0.1862 0.7530
SRP064894 SDF2L1 23753 RNAseq 1.1186 0.0058
SRP133303 SDF2L1 23753 RNAseq 0.6716 0.0029
SRP159526 SDF2L1 23753 RNAseq 0.5056 0.0816
SRP193095 SDF2L1 23753 RNAseq 0.2167 0.2994
SRP219564 SDF2L1 23753 RNAseq 1.6873 0.0029
TCGA SDF2L1 23753 RNAseq 0.0029 0.9715

Upregulated datasets: 2; Downregulated datasets: 0.  

 

Survival by SDF2L1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of SDF2L1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SDF2L1 23753 5 7 18
GSE20123 SDF2L1 23753 5 7 18
GSE43470 SDF2L1 23753 3 7 33
GSE46452 SDF2L1 23753 33 1 25
GSE47630 SDF2L1 23753 8 5 27
GSE54993 SDF2L1 23753 3 6 61
GSE54994 SDF2L1 23753 11 7 35
GSE60625 SDF2L1 23753 5 0 6
GSE74703 SDF2L1 23753 3 5 28
GSE74704 SDF2L1 23753 2 4 14
TCGA SDF2L1 23753 27 17 52

Total number of gains: 105; Total number of losses: 66; Total Number of normals: 317.  

 

Somatic mutations of SDF2L1:

 

Generating mutation plots.

 

Highly correlated genes for SDF2L1:

 

Showing top 20/719 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SDF2L1POP10.693091504
SDF2L1BMP8A0.668774303
SDF2L1YDJC0.66724806
SDF2L1XPO50.663941707
SDF2L1RCC20.638586504
SDF2L1CDC450.63461411010
SDF2L1TRIM270.629563604
SDF2L1DNAJB110.627169605
SDF2L1EEF1E10.6241604
SDF2L1SLC19A10.620162303
SDF2L1CEP850.61823404
SDF2L1KIF20B0.617746403
SDF2L1NR2C2AP0.617321604
SDF2L1PDCD2L0.616591505
SDF2L1ZNF6700.616436403
SDF2L1STX1A0.615742303
SDF2L1MIEN10.612913303
SDF2L1TMED10.611306404
SDF2L1UBE2T0.609133706
SDF2L1MELK0.609124706

For details and further investigation, click here