| Full name: stromal cell derived factor 4 | Alias Symbol: Cab45 | ||
| Type: protein-coding gene | Cytoband: 1p36.33 | ||
| Entrez ID: 51150 | HGNC ID: HGNC:24188 | Ensembl Gene: ENSG00000078808 | OMIM ID: 614282 |
| Drug and gene relationship at DGIdb | |||
Expression of SDF4:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SDF4 | 51150 | 232032_x_at | 0.4786 | 0.0565 | |
| GSE20347 | SDF4 | 51150 | 217855_x_at | 0.3987 | 0.0010 | |
| GSE23400 | SDF4 | 51150 | 217855_x_at | 0.4217 | 0.0000 | |
| GSE26886 | SDF4 | 51150 | 232032_x_at | 1.4016 | 0.0000 | |
| GSE29001 | SDF4 | 51150 | 217855_x_at | 0.3578 | 0.1489 | |
| GSE38129 | SDF4 | 51150 | 217855_x_at | 0.3741 | 0.0002 | |
| GSE45670 | SDF4 | 51150 | 232032_x_at | 0.4745 | 0.0022 | |
| GSE53622 | SDF4 | 51150 | 42067 | 0.5655 | 0.0000 | |
| GSE53624 | SDF4 | 51150 | 42067 | 0.6920 | 0.0000 | |
| GSE63941 | SDF4 | 51150 | 232032_x_at | -0.7432 | 0.0698 | |
| GSE77861 | SDF4 | 51150 | 232032_x_at | 0.4075 | 0.0855 | |
| GSE97050 | SDF4 | 51150 | A_33_P3287529 | 0.5149 | 0.1241 | |
| SRP007169 | SDF4 | 51150 | RNAseq | 2.5537 | 0.0048 | |
| SRP008496 | SDF4 | 51150 | RNAseq | 2.2890 | 0.0001 | |
| SRP064894 | SDF4 | 51150 | RNAseq | 0.9631 | 0.0000 | |
| SRP133303 | SDF4 | 51150 | RNAseq | 0.7484 | 0.0000 | |
| SRP159526 | SDF4 | 51150 | RNAseq | 0.6813 | 0.0021 | |
| SRP193095 | SDF4 | 51150 | RNAseq | 0.4784 | 0.0032 | |
| SRP219564 | SDF4 | 51150 | RNAseq | 0.4805 | 0.2376 | |
| TCGA | SDF4 | 51150 | RNAseq | 0.0012 | 0.9781 |
Upregulated datasets: 3; Downregulated datasets: 0.
Survival by SDF4 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SDF4:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SDF4 | 51150 | 3 | 7 | 20 | |
| GSE20123 | SDF4 | 51150 | 3 | 6 | 21 | |
| GSE43470 | SDF4 | 51150 | 3 | 5 | 35 | |
| GSE46452 | SDF4 | 51150 | 7 | 1 | 51 | |
| GSE47630 | SDF4 | 51150 | 8 | 4 | 28 | |
| GSE54993 | SDF4 | 51150 | 2 | 2 | 66 | |
| GSE54994 | SDF4 | 51150 | 15 | 2 | 36 | |
| GSE60625 | SDF4 | 51150 | 0 | 0 | 11 | |
| GSE74703 | SDF4 | 51150 | 3 | 3 | 30 | |
| GSE74704 | SDF4 | 51150 | 3 | 0 | 17 | |
| TCGA | SDF4 | 51150 | 14 | 20 | 62 |
Total number of gains: 61; Total number of losses: 50; Total Number of normals: 377.
Somatic mutations of SDF4:
Generating mutation plots.
Highly correlated genes for SDF4:
Showing top 20/1700 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SDF4 | FASN | 0.788796 | 3 | 0 | 3 |
| SDF4 | B3GALT6 | 0.770314 | 8 | 0 | 7 |
| SDF4 | SLC35B2 | 0.760424 | 3 | 0 | 3 |
| SDF4 | TSEN34 | 0.757553 | 3 | 0 | 3 |
| SDF4 | WDR54 | 0.752698 | 6 | 0 | 6 |
| SDF4 | ZBTB9 | 0.75266 | 4 | 0 | 4 |
| SDF4 | PDIA5 | 0.750331 | 3 | 0 | 3 |
| SDF4 | AGRN | 0.746384 | 12 | 0 | 12 |
| SDF4 | MAD2L2 | 0.742867 | 8 | 0 | 7 |
| SDF4 | PYCR2 | 0.734856 | 3 | 0 | 3 |
| SDF4 | PLOD1 | 0.732727 | 12 | 0 | 11 |
| SDF4 | RHBDD2 | 0.732632 | 7 | 0 | 7 |
| SDF4 | SPON2 | 0.731885 | 3 | 0 | 3 |
| SDF4 | RAVER1 | 0.730848 | 5 | 0 | 4 |
| SDF4 | SERPINF2 | 0.730021 | 4 | 0 | 3 |
| SDF4 | PTDSS2 | 0.730008 | 3 | 0 | 3 |
| SDF4 | MPHOSPH9 | 0.729963 | 4 | 0 | 4 |
| SDF4 | FNDC3B | 0.728392 | 10 | 0 | 9 |
| SDF4 | RAB34 | 0.723817 | 3 | 0 | 3 |
| SDF4 | TCF7L2 | 0.723538 | 3 | 0 | 3 |
For details and further investigation, click here
