SLC29A4

 

Full name: solute carrier family 29 member 4 Alias Symbol: FLJ34923|ENT4
Type: protein-coding gene Cytoband: 7p22.1
Entrez ID: 222962 HGNC ID: HGNC:23097 Ensembl Gene: ENSG00000164638 OMIM ID: 609149
Drug and gene relationship at DGIdb

 

Expression of SLC29A4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC29A4 222962 227281_at 0.2008 0.6051
GSE26886 SLC29A4 222962 227281_at 0.3015 0.0179
GSE45670 SLC29A4 222962 227281_at -0.0410 0.8017
GSE53622 SLC29A4 222962 111463 1.0013 0.0000
GSE53624 SLC29A4 222962 111463 1.2183 0.0000
GSE63941 SLC29A4 222962 1570124_at 0.5016 0.2316
GSE77861 SLC29A4 222962 227281_at 0.1440 0.3701
GSE97050 SLC29A4 222962 A_33_P3224190 -0.0813 0.7997
SRP007169 SLC29A4 222962 RNAseq 2.4315 0.0017
SRP008496 SLC29A4 222962 RNAseq 2.6476 0.0000
SRP064894 SLC29A4 222962 RNAseq 1.1518 0.0001
SRP133303 SLC29A4 222962 RNAseq 0.7935 0.0029
SRP159526 SLC29A4 222962 RNAseq 2.8083 0.0000
SRP193095 SLC29A4 222962 RNAseq 0.8522 0.0000
TCGA SLC29A4 222962 RNAseq -0.0812 0.6357

Upregulated datasets: 6; Downregulated datasets: 0.  


 

Survival by SLC29A4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC29A4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC29A4 222962 14 1 15
GSE20123 SLC29A4 222962 14 1 15
GSE43470 SLC29A4 222962 6 1 36
GSE46452 SLC29A4 222962 13 1 45
GSE47630 SLC29A4 222962 9 1 30
GSE54993 SLC29A4 222962 0 6 64
GSE54994 SLC29A4 222962 23 1 29
GSE60625 SLC29A4 222962 0 0 11
GSE74703 SLC29A4 222962 6 0 30
GSE74704 SLC29A4 222962 9 0 11
TCGA SLC29A4 222962 56 5 35

Total number of gains: 150; Total number of losses: 17; Total Number of normals: 321.  


 

Somatic mutations of SLC29A4:

 

Generating mutation plots.

 

Highly correlated genes for SLC29A4:

 

Showing top 20/236 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC29A4PPP1R12C0.739915303
SLC29A4CYP17A10.724666303
SLC29A4TEX220.724291303
SLC29A4SHISA40.72139303
SLC29A4ZNF3410.719466303
SLC29A4ZMYND100.713169303
SLC29A4ALPL0.707852303
SLC29A4DUSP90.706082303
SLC29A4SLC25A450.702895303
SLC29A4HSD17B140.680827303
SLC29A4APBA20.679265303
SLC29A4PSTPIP10.678887403
SLC29A4ZBP10.668039303
SLC29A4GGTLC10.656634403
SLC29A4CD700.655281303
SLC29A4PRSS500.654014303
SLC29A4LINC010100.652107303
SLC29A4ADAP10.64984303
SLC29A4NXNL10.649704303
SLC29A4OPRD10.649504403

For details and further investigation, click here