SLC33A1

 

Full name: solute carrier family 33 member 1 Alias Symbol: AT-1|AT1
Type: protein-coding gene Cytoband: 3q25.31
Entrez ID: 9197 HGNC ID: HGNC:95 Ensembl Gene: ENSG00000169359 OMIM ID: 603690
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of SLC33A1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC33A1 9197 203164_at 0.9578 0.0464
GSE20347 SLC33A1 9197 203164_at 1.0051 0.0000
GSE23400 SLC33A1 9197 203164_at 1.1922 0.0000
GSE26886 SLC33A1 9197 203164_at 0.4143 0.1146
GSE29001 SLC33A1 9197 203164_at 1.1373 0.0001
GSE38129 SLC33A1 9197 203164_at 0.9851 0.0000
GSE45670 SLC33A1 9197 203164_at 0.7238 0.0021
GSE53622 SLC33A1 9197 99829 0.7417 0.0000
GSE53624 SLC33A1 9197 99829 0.8807 0.0000
GSE63941 SLC33A1 9197 1554148_a_at 0.6593 0.2034
GSE77861 SLC33A1 9197 203164_at 0.8055 0.0182
GSE97050 SLC33A1 9197 A_33_P3251108 0.5694 0.1737
SRP007169 SLC33A1 9197 RNAseq 1.0928 0.0058
SRP008496 SLC33A1 9197 RNAseq 1.0537 0.0001
SRP064894 SLC33A1 9197 RNAseq 0.8206 0.0025
SRP133303 SLC33A1 9197 RNAseq 0.8973 0.0000
SRP159526 SLC33A1 9197 RNAseq 1.2316 0.0008
SRP193095 SLC33A1 9197 RNAseq 0.5079 0.0003
SRP219564 SLC33A1 9197 RNAseq 0.8513 0.0374
TCGA SLC33A1 9197 RNAseq 0.0504 0.3603

Upregulated datasets: 6; Downregulated datasets: 0.  


 

Survival by SLC33A1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC33A1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC33A1 9197 21 1 8
GSE20123 SLC33A1 9197 21 1 8
GSE43470 SLC33A1 9197 23 0 20
GSE46452 SLC33A1 9197 18 2 39
GSE47630 SLC33A1 9197 19 3 18
GSE54993 SLC33A1 9197 1 11 58
GSE54994 SLC33A1 9197 38 1 14
GSE60625 SLC33A1 9197 0 6 5
GSE74703 SLC33A1 9197 20 0 16
GSE74704 SLC33A1 9197 14 0 6
TCGA SLC33A1 9197 73 1 22

Total number of gains: 248; Total number of losses: 26; Total Number of normals: 214.  


 

Somatic mutations of SLC33A1:

 

Generating mutation plots.

 

Highly correlated genes for SLC33A1:

 

Showing top 20/1804 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC33A1GMPS0.78600813013
SLC33A1PNKP0.7852303
SLC33A1PHF60.777337303
SLC33A1SLC39A30.772857303
SLC33A1XRN10.75139303
SLC33A1ZNF7650.743787303
SLC33A1DNAJB110.741875706
SLC33A1ZNF2840.74072303
SLC33A1ATP2C10.73905111010
SLC33A1SMCR80.734765303
SLC33A1ACAP20.734543303
SLC33A1SEC61A10.729666907
SLC33A1RNF70.7269151109
SLC33A1TOPBP10.7253212012
SLC33A1ZBTB90.723783505
SLC33A1U2SURP0.723681009
SLC33A1LRRC580.72072504
SLC33A1ATR0.7203411011
SLC33A1G2E30.718995505
SLC33A1ECT20.7146931109

For details and further investigation, click here