| Full name: SMAD5 antisense RNA 1 | Alias Symbol: DAMS | ||
| Type: non-coding RNA | Cytoband: 5q31.1 | ||
| Entrez ID: 9597 | HGNC ID: HGNC:30586 | Ensembl Gene: ENSG00000164621 | OMIM ID: |
Expression of SMAD5-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SMAD5-AS1 | 9597 | 220263_at | -0.5765 | 0.1328 | |
| GSE20347 | SMAD5-AS1 | 9597 | 220263_at | 0.1106 | 0.5874 | |
| GSE23400 | SMAD5-AS1 | 9597 | 220263_at | -0.1363 | 0.0003 | |
| GSE26886 | SMAD5-AS1 | 9597 | 220263_at | -0.6314 | 0.0019 | |
| GSE29001 | SMAD5-AS1 | 9597 | 220263_at | -0.3086 | 0.2567 | |
| GSE38129 | SMAD5-AS1 | 9597 | 220263_at | 0.0329 | 0.8508 | |
| GSE45670 | SMAD5-AS1 | 9597 | 220263_at | 0.3524 | 0.3112 | |
| GSE63941 | SMAD5-AS1 | 9597 | 220263_at | -0.3896 | 0.0385 | |
| GSE77861 | SMAD5-AS1 | 9597 | 220263_at | 0.1307 | 0.5869 | |
| SRP133303 | SMAD5-AS1 | 9597 | RNAseq | 0.0079 | 0.9792 | |
| SRP159526 | SMAD5-AS1 | 9597 | RNAseq | -0.5379 | 0.3151 | |
| SRP193095 | SMAD5-AS1 | 9597 | RNAseq | -0.2732 | 0.2081 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of SMAD5-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SMAD5-AS1 | 9597 | 3 | 11 | 16 | |
| GSE20123 | SMAD5-AS1 | 9597 | 4 | 11 | 15 | |
| GSE43470 | SMAD5-AS1 | 9597 | 4 | 6 | 33 | |
| GSE46452 | SMAD5-AS1 | 9597 | 0 | 27 | 32 | |
| GSE47630 | SMAD5-AS1 | 9597 | 0 | 21 | 19 | |
| GSE54993 | SMAD5-AS1 | 9597 | 9 | 1 | 60 | |
| GSE54994 | SMAD5-AS1 | 9597 | 3 | 13 | 37 | |
| GSE60625 | SMAD5-AS1 | 9597 | 0 | 0 | 11 | |
| GSE74703 | SMAD5-AS1 | 9597 | 3 | 5 | 28 | |
| GSE74704 | SMAD5-AS1 | 9597 | 3 | 5 | 12 |
Total number of gains: 29; Total number of losses: 100; Total Number of normals: 263.
Somatic mutations of SMAD5-AS1:
Generating mutation plots.
Highly correlated genes for SMAD5-AS1:
Showing top 20/106 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SMAD5-AS1 | PTGR1 | 0.705778 | 3 | 0 | 3 |
| SMAD5-AS1 | EIF4ENIF1 | 0.687471 | 4 | 0 | 3 |
| SMAD5-AS1 | MASP1 | 0.684049 | 3 | 0 | 3 |
| SMAD5-AS1 | SLC9A9 | 0.663315 | 4 | 0 | 3 |
| SMAD5-AS1 | TXN | 0.656769 | 3 | 0 | 3 |
| SMAD5-AS1 | CPPED1 | 0.651131 | 3 | 0 | 3 |
| SMAD5-AS1 | XYLT1 | 0.650548 | 3 | 0 | 3 |
| SMAD5-AS1 | GULP1 | 0.644273 | 3 | 0 | 3 |
| SMAD5-AS1 | ARHGEF26 | 0.639946 | 3 | 0 | 3 |
| SMAD5-AS1 | CASP10 | 0.634465 | 3 | 0 | 3 |
| SMAD5-AS1 | ADH7 | 0.630311 | 4 | 0 | 3 |
| SMAD5-AS1 | GAB2 | 0.627148 | 3 | 0 | 3 |
| SMAD5-AS1 | KRT32 | 0.62643 | 3 | 0 | 3 |
| SMAD5-AS1 | STX1B | 0.620257 | 3 | 0 | 3 |
| SMAD5-AS1 | DESI1 | 0.615886 | 3 | 0 | 3 |
| SMAD5-AS1 | FBXO3 | 0.615306 | 4 | 0 | 4 |
| SMAD5-AS1 | CTTNBP2 | 0.613623 | 3 | 0 | 3 |
| SMAD5-AS1 | MFSD6 | 0.613355 | 3 | 0 | 3 |
| SMAD5-AS1 | VDAC2 | 0.610857 | 4 | 0 | 3 |
| SMAD5-AS1 | GRK5 | 0.608034 | 3 | 0 | 3 |
For details and further investigation, click here
