| Full name: small ArfGAP 1 | Alias Symbol: FLJ13159|SMAP-1 | ||
| Type: protein-coding gene | Cytoband: 6q13 | ||
| Entrez ID: 60682 | HGNC ID: HGNC:19651 | Ensembl Gene: ENSG00000112305 | OMIM ID: 611372 |
| Drug and gene relationship at DGIdb | |||
Expression of SMAP1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SMAP1 | 60682 | 218137_s_at | -0.9235 | 0.1154 | |
| GSE20347 | SMAP1 | 60682 | 218137_s_at | -1.3732 | 0.0000 | |
| GSE23400 | SMAP1 | 60682 | 218137_s_at | -0.6721 | 0.0000 | |
| GSE26886 | SMAP1 | 60682 | 218137_s_at | -0.9122 | 0.0000 | |
| GSE29001 | SMAP1 | 60682 | 218137_s_at | -1.3051 | 0.0003 | |
| GSE38129 | SMAP1 | 60682 | 218137_s_at | -0.8187 | 0.0001 | |
| GSE45670 | SMAP1 | 60682 | 218137_s_at | -0.5612 | 0.0057 | |
| GSE53622 | SMAP1 | 60682 | 116571 | -0.4977 | 0.0000 | |
| GSE53624 | SMAP1 | 60682 | 116571 | -0.7343 | 0.0000 | |
| GSE63941 | SMAP1 | 60682 | 218137_s_at | -0.4430 | 0.2178 | |
| GSE77861 | SMAP1 | 60682 | 218137_s_at | -0.9224 | 0.0196 | |
| GSE97050 | SMAP1 | 60682 | A_24_P380348 | -0.5665 | 0.1118 | |
| SRP007169 | SMAP1 | 60682 | RNAseq | -1.0501 | 0.0057 | |
| SRP008496 | SMAP1 | 60682 | RNAseq | -0.9932 | 0.0000 | |
| SRP064894 | SMAP1 | 60682 | RNAseq | -0.7803 | 0.0000 | |
| SRP133303 | SMAP1 | 60682 | RNAseq | -0.6587 | 0.0000 | |
| SRP159526 | SMAP1 | 60682 | RNAseq | -0.8734 | 0.0002 | |
| SRP193095 | SMAP1 | 60682 | RNAseq | -1.2262 | 0.0000 | |
| SRP219564 | SMAP1 | 60682 | RNAseq | -0.8562 | 0.0062 | |
| TCGA | SMAP1 | 60682 | RNAseq | -0.1887 | 0.0003 |
Upregulated datasets: 0; Downregulated datasets: 4.
Survival by SMAP1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SMAP1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SMAP1 | 60682 | 2 | 2 | 26 | |
| GSE20123 | SMAP1 | 60682 | 2 | 1 | 27 | |
| GSE43470 | SMAP1 | 60682 | 3 | 0 | 40 | |
| GSE46452 | SMAP1 | 60682 | 2 | 11 | 46 | |
| GSE47630 | SMAP1 | 60682 | 8 | 4 | 28 | |
| GSE54993 | SMAP1 | 60682 | 3 | 2 | 65 | |
| GSE54994 | SMAP1 | 60682 | 9 | 5 | 39 | |
| GSE60625 | SMAP1 | 60682 | 0 | 2 | 9 | |
| GSE74703 | SMAP1 | 60682 | 3 | 0 | 33 | |
| GSE74704 | SMAP1 | 60682 | 0 | 1 | 19 | |
| TCGA | SMAP1 | 60682 | 11 | 19 | 66 |
Total number of gains: 43; Total number of losses: 47; Total Number of normals: 398.
Somatic mutations of SMAP1:
Generating mutation plots.
Highly correlated genes for SMAP1:
Showing top 20/1500 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SMAP1 | SFTA2 | 0.783395 | 4 | 0 | 4 |
| SMAP1 | CLIC3 | 0.778761 | 8 | 0 | 8 |
| SMAP1 | ATF7 | 0.766815 | 3 | 0 | 3 |
| SMAP1 | RANBP9 | 0.761876 | 11 | 0 | 11 |
| SMAP1 | ZNRF1 | 0.758384 | 4 | 0 | 4 |
| SMAP1 | SPNS2 | 0.754258 | 5 | 0 | 5 |
| SMAP1 | ACPP | 0.750353 | 10 | 0 | 9 |
| SMAP1 | SPAG17 | 0.749081 | 4 | 0 | 4 |
| SMAP1 | TMOD3 | 0.745519 | 10 | 0 | 10 |
| SMAP1 | EPB41L4A | 0.743055 | 8 | 0 | 8 |
| SMAP1 | ACOX1 | 0.742792 | 9 | 0 | 8 |
| SMAP1 | KRT78 | 0.742402 | 6 | 0 | 6 |
| SMAP1 | TP53I3 | 0.738254 | 10 | 0 | 9 |
| SMAP1 | CRISP3 | 0.738109 | 10 | 0 | 10 |
| SMAP1 | RAB11A | 0.736057 | 11 | 0 | 10 |
| SMAP1 | GDPD3 | 0.731573 | 10 | 0 | 10 |
| SMAP1 | UBL3 | 0.729873 | 11 | 0 | 9 |
| SMAP1 | GOLGA4 | 0.728924 | 8 | 0 | 7 |
| SMAP1 | CAPN14 | 0.726631 | 6 | 0 | 6 |
| SMAP1 | BLNK | 0.724203 | 11 | 0 | 9 |
For details and further investigation, click here
