| Full name: snail family transcriptional repressor 3 | Alias Symbol: SMUC|Zfp293 | ||
| Type: protein-coding gene | Cytoband: 16q24.2 | ||
| Entrez ID: 333929 | HGNC ID: HGNC:18411 | Ensembl Gene: ENSG00000185669 | OMIM ID: 612741 |
| Drug and gene relationship at DGIdb | |||
Expression of SNAI3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNAI3 | 333929 | 1560228_at | 0.0820 | 0.8724 | |
| GSE26886 | SNAI3 | 333929 | 1560228_at | 0.0762 | 0.5221 | |
| GSE45670 | SNAI3 | 333929 | 1560228_at | 0.0153 | 0.8789 | |
| GSE63941 | SNAI3 | 333929 | 1560228_at | 0.4785 | 0.0065 | |
| GSE77861 | SNAI3 | 333929 | 1560228_at | -0.0447 | 0.5858 | |
| GSE97050 | SNAI3 | 333929 | A_23_P170574 | 0.2471 | 0.3716 | |
| SRP133303 | SNAI3 | 333929 | RNAseq | -0.1939 | 0.4644 | |
| SRP159526 | SNAI3 | 333929 | RNAseq | -0.8032 | 0.2921 | |
| SRP219564 | SNAI3 | 333929 | RNAseq | 0.0263 | 0.9538 | |
| TCGA | SNAI3 | 333929 | RNAseq | -1.1452 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by SNAI3 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of SNAI3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNAI3 | 333929 | 4 | 3 | 23 | |
| GSE20123 | SNAI3 | 333929 | 4 | 3 | 23 | |
| GSE43470 | SNAI3 | 333929 | 1 | 13 | 29 | |
| GSE46452 | SNAI3 | 333929 | 38 | 1 | 20 | |
| GSE47630 | SNAI3 | 333929 | 11 | 9 | 20 | |
| GSE54993 | SNAI3 | 333929 | 3 | 4 | 63 | |
| GSE54994 | SNAI3 | 333929 | 9 | 11 | 33 | |
| GSE60625 | SNAI3 | 333929 | 4 | 0 | 7 | |
| GSE74703 | SNAI3 | 333929 | 1 | 9 | 26 | |
| GSE74704 | SNAI3 | 333929 | 3 | 2 | 15 | |
| TCGA | SNAI3 | 333929 | 28 | 15 | 53 |
Total number of gains: 106; Total number of losses: 70; Total Number of normals: 312.
Somatic mutations of SNAI3:
Generating mutation plots.
Highly correlated genes for SNAI3:
Showing top 20/132 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNAI3 | SAMD1 | 0.77455 | 3 | 0 | 3 |
| SNAI3 | TAGAP | 0.761678 | 3 | 0 | 3 |
| SNAI3 | NFKBID | 0.757281 | 3 | 0 | 3 |
| SNAI3 | PTPN6 | 0.754499 | 3 | 0 | 3 |
| SNAI3 | LILRB1 | 0.753049 | 3 | 0 | 3 |
| SNAI3 | RHOH | 0.74692 | 3 | 0 | 3 |
| SNAI3 | COX15 | 0.746145 | 3 | 0 | 3 |
| SNAI3 | TNFRSF4 | 0.722927 | 4 | 0 | 3 |
| SNAI3 | ARHGEF16 | 0.720994 | 3 | 0 | 3 |
| SNAI3 | APOBEC3G | 0.720417 | 3 | 0 | 3 |
| SNAI3 | NDUFA9 | 0.719798 | 3 | 0 | 3 |
| SNAI3 | PLCB2 | 0.718109 | 3 | 0 | 3 |
| SNAI3 | SYNE2 | 0.717551 | 3 | 0 | 3 |
| SNAI3 | GAPDH | 0.715579 | 3 | 0 | 3 |
| SNAI3 | CYSLTR2 | 0.71442 | 3 | 0 | 3 |
| SNAI3 | SCML4 | 0.708018 | 3 | 0 | 3 |
| SNAI3 | GPR132 | 0.706414 | 3 | 0 | 3 |
| SNAI3 | VNN2 | 0.705476 | 3 | 0 | 3 |
| SNAI3 | LCE1E | 0.702322 | 3 | 0 | 3 |
| SNAI3 | SCAF1 | 0.700497 | 3 | 0 | 3 |
For details and further investigation, click here
