| Full name: small nucleolar RNA, C/D box 8 | Alias Symbol: mgU6-53 | ||
| Type: non-coding RNA | Cytoband: 14q11.2 | ||
| Entrez ID: 319103 | HGNC ID: HGNC:20159 | Ensembl Gene: ENSG00000200785 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SNORD8:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNORD8 | 319103 | 1566340_at | -0.0104 | 0.9879 | |
| GSE26886 | SNORD8 | 319103 | 1566340_at | 0.0325 | 0.8635 | |
| GSE45670 | SNORD8 | 319103 | 1566340_at | 0.0255 | 0.8689 | |
| GSE63941 | SNORD8 | 319103 | 1566340_at | 0.1180 | 0.4151 | |
| GSE77861 | SNORD8 | 319103 | 1566340_at | -0.0815 | 0.3842 | |
| GSE97050 | SNORD8 | 319103 | A_33_P3843358 | 0.1645 | 0.4158 | |
| SRP007169 | SNORD8 | 319103 | RNAseq | -0.2121 | 0.8309 | |
| SRP008496 | SNORD8 | 319103 | RNAseq | -0.7113 | 0.5681 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SNORD8 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of SNORD8:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNORD8 | 319103 | 9 | 3 | 18 | |
| GSE20123 | SNORD8 | 319103 | 9 | 3 | 18 | |
| GSE43470 | SNORD8 | 319103 | 7 | 2 | 34 | |
| GSE46452 | SNORD8 | 319103 | 18 | 2 | 39 | |
| GSE47630 | SNORD8 | 319103 | 10 | 10 | 20 | |
| GSE54993 | SNORD8 | 319103 | 3 | 11 | 56 | |
| GSE54994 | SNORD8 | 319103 | 18 | 5 | 30 | |
| GSE60625 | SNORD8 | 319103 | 0 | 2 | 9 | |
| GSE74703 | SNORD8 | 319103 | 6 | 2 | 28 | |
| GSE74704 | SNORD8 | 319103 | 4 | 2 | 14 | |
| TCGA | SNORD8 | 319103 | 27 | 16 | 53 |
Total number of gains: 111; Total number of losses: 58; Total Number of normals: 319.
Somatic mutations of SNORD8:
Generating mutation plots.
Highly correlated genes for SNORD8:
Showing top 20/33 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNORD8 | AP4S1 | 0.704598 | 3 | 0 | 3 |
| SNORD8 | UBE2NL | 0.69503 | 3 | 0 | 3 |
| SNORD8 | SNX29 | 0.688541 | 3 | 0 | 3 |
| SNORD8 | ITPKC | 0.675527 | 3 | 0 | 3 |
| SNORD8 | CCDC58 | 0.674766 | 3 | 0 | 3 |
| SNORD8 | COMMD9 | 0.667558 | 3 | 0 | 3 |
| SNORD8 | MRPS22 | 0.660041 | 3 | 0 | 3 |
| SNORD8 | UBE2F | 0.648516 | 3 | 0 | 3 |
| SNORD8 | RAB3GAP2 | 0.645453 | 4 | 0 | 3 |
| SNORD8 | MPHOSPH10 | 0.64537 | 4 | 0 | 3 |
| SNORD8 | NDUFA2 | 0.644509 | 3 | 0 | 3 |
| SNORD8 | LAIR1 | 0.642095 | 3 | 0 | 3 |
| SNORD8 | ACAA1 | 0.638126 | 3 | 0 | 3 |
| SNORD8 | LIMS1 | 0.635899 | 4 | 0 | 3 |
| SNORD8 | CD82 | 0.633588 | 3 | 0 | 3 |
| SNORD8 | PLD6 | 0.628848 | 3 | 0 | 3 |
| SNORD8 | CWC27 | 0.627851 | 4 | 0 | 3 |
| SNORD8 | NOXO1 | 0.619107 | 3 | 0 | 3 |
| SNORD8 | ZNF214 | 0.61594 | 3 | 0 | 3 |
| SNORD8 | LILRA4 | 0.613147 | 3 | 0 | 3 |
For details and further investigation, click here
