| Full name: sorting nexin 9 | Alias Symbol: SH3PX1|SDP1|SH3PXD3A | ||
| Type: protein-coding gene | Cytoband: 6q25.3 | ||
| Entrez ID: 51429 | HGNC ID: HGNC:14973 | Ensembl Gene: ENSG00000130340 | OMIM ID: 605952 |
| Drug and gene relationship at DGIdb | |||
Expression of SNX9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNX9 | 51429 | 223028_s_at | -0.8468 | 0.0399 | |
| GSE26886 | SNX9 | 51429 | 223028_s_at | -2.7850 | 0.0000 | |
| GSE45670 | SNX9 | 51429 | 223028_s_at | -1.1957 | 0.0009 | |
| GSE53622 | SNX9 | 51429 | 26490 | -0.9589 | 0.0000 | |
| GSE53624 | SNX9 | 51429 | 26490 | -1.1244 | 0.0000 | |
| GSE63941 | SNX9 | 51429 | 223028_s_at | -1.1528 | 0.0142 | |
| GSE77861 | SNX9 | 51429 | 223028_s_at | -1.1285 | 0.0129 | |
| GSE97050 | SNX9 | 51429 | A_24_P179044 | -0.9110 | 0.0799 | |
| SRP007169 | SNX9 | 51429 | RNAseq | -2.7759 | 0.0000 | |
| SRP008496 | SNX9 | 51429 | RNAseq | -2.7366 | 0.0000 | |
| SRP064894 | SNX9 | 51429 | RNAseq | -1.5103 | 0.0000 | |
| SRP133303 | SNX9 | 51429 | RNAseq | -0.9499 | 0.0000 | |
| SRP159526 | SNX9 | 51429 | RNAseq | -1.0610 | 0.0000 | |
| SRP193095 | SNX9 | 51429 | RNAseq | -2.0296 | 0.0000 | |
| SRP219564 | SNX9 | 51429 | RNAseq | -1.0168 | 0.0184 | |
| TCGA | SNX9 | 51429 | RNAseq | -0.2875 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 11.
Survival by SNX9 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SNX9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNX9 | 51429 | 2 | 5 | 23 | |
| GSE20123 | SNX9 | 51429 | 2 | 4 | 24 | |
| GSE43470 | SNX9 | 51429 | 4 | 0 | 39 | |
| GSE46452 | SNX9 | 51429 | 3 | 10 | 46 | |
| GSE47630 | SNX9 | 51429 | 9 | 4 | 27 | |
| GSE54993 | SNX9 | 51429 | 3 | 2 | 65 | |
| GSE54994 | SNX9 | 51429 | 8 | 9 | 36 | |
| GSE60625 | SNX9 | 51429 | 0 | 1 | 10 | |
| GSE74703 | SNX9 | 51429 | 4 | 0 | 32 | |
| GSE74704 | SNX9 | 51429 | 0 | 2 | 18 | |
| TCGA | SNX9 | 51429 | 14 | 23 | 59 |
Total number of gains: 49; Total number of losses: 60; Total Number of normals: 379.
Somatic mutations of SNX9:
Generating mutation plots.
Highly correlated genes for SNX9:
Showing top 20/1285 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNX9 | CAB39L | 0.82046 | 7 | 0 | 7 |
| SNX9 | MYZAP | 0.807383 | 3 | 0 | 3 |
| SNX9 | SH3BGRL2 | 0.801955 | 7 | 0 | 7 |
| SNX9 | UBL3 | 0.798631 | 7 | 0 | 7 |
| SNX9 | PHACTR2 | 0.798397 | 7 | 0 | 7 |
| SNX9 | GYS2 | 0.795475 | 6 | 0 | 6 |
| SNX9 | KIAA0232 | 0.780052 | 8 | 0 | 8 |
| SNX9 | PMM1 | 0.775782 | 6 | 0 | 6 |
| SNX9 | CGNL1 | 0.77204 | 7 | 0 | 7 |
| SNX9 | TRIOBP | 0.768315 | 5 | 0 | 5 |
| SNX9 | PAQR8 | 0.765987 | 7 | 0 | 7 |
| SNX9 | CNN3 | 0.763744 | 4 | 0 | 4 |
| SNX9 | STK39 | 0.761294 | 7 | 0 | 7 |
| SNX9 | C18orf25 | 0.758927 | 7 | 0 | 7 |
| SNX9 | GPD1L | 0.757448 | 7 | 0 | 7 |
| SNX9 | SNORA68 | 0.755112 | 4 | 0 | 4 |
| SNX9 | STX7 | 0.754108 | 7 | 0 | 7 |
| SNX9 | SFTA2 | 0.754044 | 4 | 0 | 4 |
| SNX9 | PLEKHA6 | 0.753794 | 7 | 0 | 7 |
| SNX9 | KRT78 | 0.750431 | 7 | 0 | 7 |
For details and further investigation, click here
