| Full name: SRY-box transcription factor 13 | Alias Symbol: Sox-13|ICA12|MGC117216 | ||
| Type: protein-coding gene | Cytoband: 1q32.1 | ||
| Entrez ID: 9580 | HGNC ID: HGNC:11192 | Ensembl Gene: ENSG00000143842 | OMIM ID: 604748 |
| Drug and gene relationship at DGIdb | |||
Expression of SOX13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SOX13 | 9580 | 209736_at | 0.2748 | 0.5648 | |
| GSE20347 | SOX13 | 9580 | 209736_at | 0.3531 | 0.0420 | |
| GSE23400 | SOX13 | 9580 | 209736_at | 0.2283 | 0.0004 | |
| GSE26886 | SOX13 | 9580 | 209736_at | 0.0707 | 0.7034 | |
| GSE29001 | SOX13 | 9580 | 209736_at | -0.0043 | 0.9864 | |
| GSE38129 | SOX13 | 9580 | 209736_at | 0.2232 | 0.0780 | |
| GSE45670 | SOX13 | 9580 | 209736_at | 0.1964 | 0.3086 | |
| GSE53622 | SOX13 | 9580 | 47382 | 0.2361 | 0.0859 | |
| GSE53624 | SOX13 | 9580 | 47382 | 0.5111 | 0.0000 | |
| GSE63941 | SOX13 | 9580 | 209736_at | 1.2881 | 0.0047 | |
| GSE77861 | SOX13 | 9580 | 209736_at | 0.2827 | 0.0657 | |
| GSE97050 | SOX13 | 9580 | A_33_P3325110 | 0.1583 | 0.5242 | |
| SRP007169 | SOX13 | 9580 | RNAseq | 0.7187 | 0.2050 | |
| SRP008496 | SOX13 | 9580 | RNAseq | 0.7927 | 0.0743 | |
| SRP064894 | SOX13 | 9580 | RNAseq | 0.0889 | 0.6239 | |
| SRP133303 | SOX13 | 9580 | RNAseq | 0.1426 | 0.4930 | |
| SRP159526 | SOX13 | 9580 | RNAseq | 1.0769 | 0.0002 | |
| SRP193095 | SOX13 | 9580 | RNAseq | 0.5297 | 0.0009 | |
| SRP219564 | SOX13 | 9580 | RNAseq | 0.1328 | 0.7449 | |
| TCGA | SOX13 | 9580 | RNAseq | 0.1007 | 0.2868 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by SOX13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SOX13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SOX13 | 9580 | 11 | 0 | 19 | |
| GSE20123 | SOX13 | 9580 | 11 | 0 | 19 | |
| GSE43470 | SOX13 | 9580 | 6 | 0 | 37 | |
| GSE46452 | SOX13 | 9580 | 3 | 1 | 55 | |
| GSE47630 | SOX13 | 9580 | 14 | 0 | 26 | |
| GSE54993 | SOX13 | 9580 | 0 | 6 | 64 | |
| GSE54994 | SOX13 | 9580 | 15 | 0 | 38 | |
| GSE60625 | SOX13 | 9580 | 0 | 0 | 11 | |
| GSE74703 | SOX13 | 9580 | 6 | 0 | 30 | |
| GSE74704 | SOX13 | 9580 | 5 | 0 | 15 | |
| TCGA | SOX13 | 9580 | 43 | 4 | 49 |
Total number of gains: 114; Total number of losses: 11; Total Number of normals: 363.
Somatic mutations of SOX13:
Generating mutation plots.
Highly correlated genes for SOX13:
Showing top 20/595 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SOX13 | QTRT1 | 0.777879 | 3 | 0 | 3 |
| SOX13 | CALML4 | 0.77246 | 3 | 0 | 3 |
| SOX13 | THAP7 | 0.767174 | 3 | 0 | 3 |
| SOX13 | CPNE2 | 0.763721 | 3 | 0 | 3 |
| SOX13 | SLC25A33 | 0.759194 | 3 | 0 | 3 |
| SOX13 | SF1 | 0.753394 | 3 | 0 | 3 |
| SOX13 | INPP5B | 0.751378 | 3 | 0 | 3 |
| SOX13 | PPP5C | 0.741442 | 5 | 0 | 5 |
| SOX13 | DAG1 | 0.735272 | 4 | 0 | 3 |
| SOX13 | DOCK6 | 0.734085 | 3 | 0 | 3 |
| SOX13 | CSTF2T | 0.728455 | 3 | 0 | 3 |
| SOX13 | SETD1A | 0.72568 | 4 | 0 | 4 |
| SOX13 | CUEDC2 | 0.725468 | 3 | 0 | 3 |
| SOX13 | DNAJC11 | 0.72474 | 4 | 0 | 4 |
| SOX13 | PPP2R2D | 0.717469 | 3 | 0 | 3 |
| SOX13 | CELSR1 | 0.715807 | 3 | 0 | 3 |
| SOX13 | POLR2J | 0.715805 | 5 | 0 | 5 |
| SOX13 | MRPL11 | 0.708804 | 3 | 0 | 3 |
| SOX13 | TSPAN15 | 0.70657 | 5 | 0 | 5 |
| SOX13 | PPP1R35 | 0.706185 | 4 | 0 | 4 |
For details and further investigation, click here
